Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.19■□□□□ 0.5
SP9P0CG40 AC239800.4-201ENST00000603712 296 ntBASIC18.19■□□□□ 0.5
SP9P0CG40 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.19■□□□□ 0.5
SP9P0CG40 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.19■□□□□ 0.5
SP9P0CG40 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.19■□□□□ 0.5
SP9P0CG40 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.19■□□□□ 0.5
SP9P0CG40 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
SP9P0CG40 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SP9P0CG40 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.19■□□□□ 0.5
SP9P0CG40 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.19■□□□□ 0.5
SP9P0CG40 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SP9P0CG40 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.18■□□□□ 0.5
SP9P0CG40 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SP9P0CG40 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.18■□□□□ 0.5
SP9P0CG40 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SP9P0CG40 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SP9P0CG40 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SP9P0CG40 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SP9P0CG40 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SP9P0CG40 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SP9P0CG40 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SP9P0CG40 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SP9P0CG40 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SP9P0CG40 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SP9P0CG40 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SP9P0CG40 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SP9P0CG40 AL035633.1-201ENST00000406139 838 ntBASIC18.18■□□□□ 0.5
SP9P0CG40 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SP9P0CG40 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.18■□□□□ 0.5
SP9P0CG40 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.18■□□□□ 0.5
SP9P0CG40 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.18■□□□□ 0.5
SP9P0CG40 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.18■□□□□ 0.5
SP9P0CG40 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.18■□□□□ 0.5
SP9P0CG40 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.18■□□□□ 0.5
SP9P0CG40 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.18■□□□□ 0.5
SP9P0CG40 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SP9P0CG40 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SP9P0CG40 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SP9P0CG40 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SP9P0CG40 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SP9P0CG40 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SP9P0CG40 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SP9P0CG40 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SP9P0CG40 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SP9P0CG40 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.17■□□□□ 0.5
SP9P0CG40 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
SP9P0CG40 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SP9P0CG40 MCCD1P2-201ENST00000423228 335 ntBASIC18.17■□□□□ 0.5
SP9P0CG40 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.17■□□□□ 0.5
SP9P0CG40 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.17■□□□□ 0.5
SP9P0CG40 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.17■□□□□ 0.5
SP9P0CG40 YBX1P5-201ENST00000509441 847 ntBASIC18.17■□□□□ 0.5
SP9P0CG40 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.17■□□□□ 0.5
SP9P0CG40 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SP9P0CG40 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.17■□□□□ 0.5
SP9P0CG40 NKAPP1-205ENST00000585790 367 ntBASIC18.17■□□□□ 0.5
SP9P0CG40 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.17■□□□□ 0.5
SP9P0CG40 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.17■□□□□ 0.5
SP9P0CG40 AC064836.3-201ENST00000607928 673 ntBASIC18.17■□□□□ 0.5
SP9P0CG40 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.17■□□□□ 0.5
SP9P0CG40 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SP9P0CG40 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SP9P0CG40 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.17■□□□□ 0.5
SP9P0CG40 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SP9P0CG40 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.17■□□□□ 0.5
SP9P0CG40 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SP9P0CG40 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.17■□□□□ 0.5
SP9P0CG40 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.16■□□□□ 0.5
SP9P0CG40 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
SP9P0CG40 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SP9P0CG40 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
SP9P0CG40 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.16■□□□□ 0.5
SP9P0CG40 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SP9P0CG40 FEM1AP3-201ENST00000403722 1741 ntBASIC18.16■□□□□ 0.5
SP9P0CG40 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.16■□□□□ 0.5
SP9P0CG40 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SP9P0CG40 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SP9P0CG40 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SP9P0CG40 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.16■□□□□ 0.5
SP9P0CG40 AC254562.1-201ENST00000417586 456 ntBASIC18.16■□□□□ 0.5
SP9P0CG40 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SP9P0CG40 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SP9P0CG40 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SP9P0CG40 AC008687.5-201ENST00000593746 558 ntBASIC18.16■□□□□ 0.5
SP9P0CG40 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SP9P0CG40 Z98044.1-201ENST00000632503 1764 ntBASIC18.16■□□□□ 0.5
SP9P0CG40 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.16■□□□□ 0.5
SP9P0CG40 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
SP9P0CG40 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SP9P0CG40 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SP9P0CG40 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.16■□□□□ 0.5
SP9P0CG40 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
SP9P0CG40 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.15■□□□□ 0.5
SP9P0CG40 AC125634.1-201ENST00000438758 1403 ntBASIC18.15■□□□□ 0.5
SP9P0CG40 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.15■□□□□ 0.5
SP9P0CG40 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SP9P0CG40 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SP9P0CG40 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SP9P0CG40 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
SP9P0CG40 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms