Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FREM3P0C091 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.81■□□□□ 0.28
FREM3P0C091 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FREM3P0C091 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FREM3P0C091 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.81■□□□□ 0.28
FREM3P0C091 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
FREM3P0C091 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FREM3P0C091 AC034232.1-201ENST00000506026 1064 ntBASIC16.81■□□□□ 0.28
FREM3P0C091 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
FREM3P0C091 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
FREM3P0C091 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FREM3P0C091 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FREM3P0C091 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
FREM3P0C091 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.8■□□□□ 0.28
FREM3P0C091 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FREM3P0C091 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
FREM3P0C091 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FREM3P0C091 KRT8P50-201ENST00000562022 1438 ntBASIC16.8■□□□□ 0.28
FREM3P0C091 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.8■□□□□ 0.28
FREM3P0C091 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.8■□□□□ 0.28
FREM3P0C091 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FREM3P0C091 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.8■□□□□ 0.28
FREM3P0C091 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FREM3P0C091 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FREM3P0C091 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FREM3P0C091 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FREM3P0C091 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.8■□□□□ 0.28
FREM3P0C091 MIR3180-1-201ENST00000580374 94 ntBASIC16.8■□□□□ 0.28
FREM3P0C091 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.8■□□□□ 0.28
FREM3P0C091 MIR3180-3-201ENST00000584616 94 ntBASIC16.8■□□□□ 0.28
FREM3P0C091 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.8■□□□□ 0.28
FREM3P0C091 AC024243.1-201ENST00000609234 778 ntBASIC16.8■□□□□ 0.28
FREM3P0C091 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.8■□□□□ 0.28
FREM3P0C091 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.8■□□□□ 0.28
FREM3P0C091 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
FREM3P0C091 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.8■□□□□ 0.28
FREM3P0C091 KRT8P32-201ENST00000512863 1461 ntBASIC16.8■□□□□ 0.28
FREM3P0C091 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.8■□□□□ 0.28
FREM3P0C091 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
FREM3P0C091 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FREM3P0C091 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
FREM3P0C091 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FREM3P0C091 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FREM3P0C091 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
FREM3P0C091 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
FREM3P0C091 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
FREM3P0C091 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.79■□□□□ 0.28
FREM3P0C091 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FREM3P0C091 HCG4P8-203ENST00000443049 980 ntBASIC16.79■□□□□ 0.28
FREM3P0C091 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.79■□□□□ 0.28
FREM3P0C091 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.79■□□□□ 0.28
FREM3P0C091 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
FREM3P0C091 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FREM3P0C091 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FREM3P0C091 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FREM3P0C091 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FREM3P0C091 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FREM3P0C091 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.79■□□□□ 0.28
FREM3P0C091 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.79■□□□□ 0.28
FREM3P0C091 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FREM3P0C091 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FREM3P0C091 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FREM3P0C091 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FREM3P0C091 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.79■□□□□ 0.28
FREM3P0C091 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
FREM3P0C091 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FREM3P0C091 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FREM3P0C091 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FREM3P0C091 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FREM3P0C091 HOMER2P1-201ENST00000455653 964 ntBASIC16.79■□□□□ 0.28
FREM3P0C091 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.79■□□□□ 0.28
FREM3P0C091 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FREM3P0C091 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.79■□□□□ 0.28
FREM3P0C091 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.79■□□□□ 0.28
FREM3P0C091 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.79■□□□□ 0.28
FREM3P0C091 AC104390.1-201ENST00000555663 520 ntBASIC16.79■□□□□ 0.28
FREM3P0C091 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.79■□□□□ 0.28
FREM3P0C091 MIR3917-201ENST00000580971 93 ntBASIC16.79■□□□□ 0.28
FREM3P0C091 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
FREM3P0C091 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.79■□□□□ 0.28
FREM3P0C091 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.79■□□□□ 0.28
FREM3P0C091 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
FREM3P0C091 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
FREM3P0C091 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FREM3P0C091 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.79■□□□□ 0.28
FREM3P0C091 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FREM3P0C091 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.79■□□□□ 0.28
FREM3P0C091 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
FREM3P0C091 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FREM3P0C091 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FREM3P0C091 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FREM3P0C091 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.78■□□□□ 0.28
FREM3P0C091 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FREM3P0C091 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FREM3P0C091 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FREM3P0C091 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
FREM3P0C091 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FREM3P0C091 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.78■□□□□ 0.28
FREM3P0C091 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.78■□□□□ 0.28
FREM3P0C091 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms