Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RBP1P09455 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RBP1P09455 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.27■□□□□ 0.52
RBP1P09455 MIR564-202ENST00000385049 94 ntBASIC18.27■□□□□ 0.52
RBP1P09455 MESTP1-201ENST00000404287 994 ntBASIC18.27■□□□□ 0.52
RBP1P09455 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.27■□□□□ 0.52
RBP1P09455 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RBP1P09455 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.27■□□□□ 0.52
RBP1P09455 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.27■□□□□ 0.52
RBP1P09455 AL359736.2-201ENST00000621992 437 ntBASIC18.27■□□□□ 0.52
RBP1P09455 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.27■□□□□ 0.52
RBP1P09455 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
RBP1P09455 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RBP1P09455 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RBP1P09455 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RBP1P09455 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RBP1P09455 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RBP1P09455 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.27■□□□□ 0.51
RBP1P09455 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
RBP1P09455 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
RBP1P09455 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RBP1P09455 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RBP1P09455 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
RBP1P09455 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
RBP1P09455 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.26■□□□□ 0.51
RBP1P09455 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RBP1P09455 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RBP1P09455 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RBP1P09455 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RBP1P09455 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RBP1P09455 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RBP1P09455 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RBP1P09455 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RBP1P09455 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.26■□□□□ 0.51
RBP1P09455 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RBP1P09455 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.26■□□□□ 0.51
RBP1P09455 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RBP1P09455 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.26■□□□□ 0.51
RBP1P09455 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.26■□□□□ 0.51
RBP1P09455 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.26■□□□□ 0.51
RBP1P09455 AC008622.2-201ENST00000617006 1229 ntBASIC18.26■□□□□ 0.51
RBP1P09455 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
RBP1P09455 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RBP1P09455 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.26■□□□□ 0.51
RBP1P09455 AC096733.2-201ENST00000609937 1394 ntBASIC18.26■□□□□ 0.51
RBP1P09455 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RBP1P09455 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.26■□□□□ 0.51
RBP1P09455 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RBP1P09455 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RBP1P09455 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RBP1P09455 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.25■□□□□ 0.51
RBP1P09455 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RBP1P09455 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RBP1P09455 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.25■□□□□ 0.51
RBP1P09455 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RBP1P09455 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RBP1P09455 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
RBP1P09455 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RBP1P09455 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RBP1P09455 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RBP1P09455 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RBP1P09455 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RBP1P09455 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RBP1P09455 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.25■□□□□ 0.51
RBP1P09455 FAM197Y1-201ENST00000421178 764 ntBASIC18.25■□□□□ 0.51
RBP1P09455 MCCD1P1-208ENST00000445732 328 ntBASIC18.25■□□□□ 0.51
RBP1P09455 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.25■□□□□ 0.51
RBP1P09455 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.25■□□□□ 0.51
RBP1P09455 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.25■□□□□ 0.51
RBP1P09455 DGCR10-201ENST00000609839 495 ntBASIC18.25■□□□□ 0.51
RBP1P09455 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RBP1P09455 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RBP1P09455 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RBP1P09455 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RBP1P09455 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RBP1P09455 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RBP1P09455 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
RBP1P09455 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RBP1P09455 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.25■□□□□ 0.51
RBP1P09455 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RBP1P09455 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RBP1P09455 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.25■□□□□ 0.51
RBP1P09455 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RBP1P09455 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RBP1P09455 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.25■□□□□ 0.51
RBP1P09455 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.25■□□□□ 0.51
RBP1P09455 AC008764.6-201ENST00000595909 2069 ntBASIC18.24■□□□□ 0.51
RBP1P09455 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RBP1P09455 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RBP1P09455 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RBP1P09455 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RBP1P09455 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RBP1P09455 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RBP1P09455 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RBP1P09455 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RBP1P09455 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
RBP1P09455 AL023284.2-201ENST00000405850 579 ntBASIC18.24■□□□□ 0.51
RBP1P09455 FAM201B-201ENST00000458407 597 ntBASIC18.24■□□□□ 0.51
RBP1P09455 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.24■□□□□ 0.51
RBP1P09455 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms