Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TPM3P06753 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.77■□□□□ 0.92
TPM3P06753 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.77■□□□□ 0.92
TPM3P06753 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TPM3P06753 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.77■□□□□ 0.92
TPM3P06753 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TPM3P06753 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.77■□□□□ 0.92
TPM3P06753 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.77■□□□□ 0.92
TPM3P06753 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.77■□□□□ 0.92
TPM3P06753 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.77■□□□□ 0.92
TPM3P06753 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.77■□□□□ 0.92
TPM3P06753 AL160286.2-201ENST00000567150 934 ntBASIC20.77■□□□□ 0.92
TPM3P06753 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.77■□□□□ 0.92
TPM3P06753 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TPM3P06753 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TPM3P06753 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TPM3P06753 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TPM3P06753 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TPM3P06753 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TPM3P06753 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TPM3P06753 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TPM3P06753 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TPM3P06753 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TPM3P06753 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.77■□□□□ 0.91
TPM3P06753 HEIH-201ENST00000623091 1652 ntBASIC20.77■□□□□ 0.91
TPM3P06753 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
TPM3P06753 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.76■□□□□ 0.91
TPM3P06753 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TPM3P06753 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TPM3P06753 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TPM3P06753 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TPM3P06753 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.76■□□□□ 0.91
TPM3P06753 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.76■□□□□ 0.91
TPM3P06753 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TPM3P06753 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.76■□□□□ 0.91
TPM3P06753 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.76■□□□□ 0.91
TPM3P06753 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.76■□□□□ 0.91
TPM3P06753 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.76■□□□□ 0.91
TPM3P06753 TSPY23P-201ENST00000440136 739 ntBASIC20.76■□□□□ 0.91
TPM3P06753 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.76■□□□□ 0.91
TPM3P06753 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.76■□□□□ 0.91
TPM3P06753 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.76■□□□□ 0.91
TPM3P06753 PNMA6B-201ENST00000538162 1200 ntBASIC20.76■□□□□ 0.91
TPM3P06753 AC060766.5-201ENST00000590539 871 ntBASIC20.76■□□□□ 0.91
TPM3P06753 MYC-208ENST00000641036 567 ntBASIC20.76■□□□□ 0.91
TPM3P06753 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
TPM3P06753 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TPM3P06753 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
TPM3P06753 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
TPM3P06753 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TPM3P06753 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TPM3P06753 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TPM3P06753 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TPM3P06753 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TPM3P06753 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TPM3P06753 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TPM3P06753 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.75■□□□□ 0.91
TPM3P06753 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TPM3P06753 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TPM3P06753 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.75■□□□□ 0.91
TPM3P06753 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.75■□□□□ 0.91
TPM3P06753 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
TPM3P06753 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
TPM3P06753 AL121832.2-201ENST00000610979 668 ntBASIC20.75■□□□□ 0.91
TPM3P06753 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TPM3P06753 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TPM3P06753 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TPM3P06753 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TPM3P06753 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TPM3P06753 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TPM3P06753 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TPM3P06753 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
TPM3P06753 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TPM3P06753 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC20.74■□□□□ 0.91
TPM3P06753 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC20.74■□□□□ 0.91
TPM3P06753 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TPM3P06753 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TPM3P06753 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.74■□□□□ 0.91
TPM3P06753 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TPM3P06753 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
TPM3P06753 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.74■□□□□ 0.91
TPM3P06753 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TPM3P06753 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.74■□□□□ 0.91
TPM3P06753 CDCA4P2-201ENST00000441182 718 ntBASIC20.74■□□□□ 0.91
TPM3P06753 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.74■□□□□ 0.91
TPM3P06753 AC097658.1-201ENST00000475555 843 ntBASIC20.74■□□□□ 0.91
TPM3P06753 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.74■□□□□ 0.91
TPM3P06753 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.74■□□□□ 0.91
TPM3P06753 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TPM3P06753 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.74■□□□□ 0.91
TPM3P06753 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.74■□□□□ 0.91
TPM3P06753 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.74■□□□□ 0.91
TPM3P06753 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.74■□□□□ 0.91
TPM3P06753 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TPM3P06753 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TPM3P06753 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TPM3P06753 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.74■□□□□ 0.91
TPM3P06753 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TPM3P06753 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
TPM3P06753 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms