Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 AL499627.1-201ENST00000569373 2188 ntBASIC16.22■□□□□ 0.19
LCATP04180 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LCATP04180 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LCATP04180 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LCATP04180 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LCATP04180 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.22■□□□□ 0.19
LCATP04180 AL023284.2-201ENST00000405850 579 ntBASIC16.22■□□□□ 0.19
LCATP04180 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.22■□□□□ 0.19
LCATP04180 MCCD1P1-208ENST00000445732 328 ntBASIC16.22■□□□□ 0.19
LCATP04180 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
LCATP04180 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.22■□□□□ 0.19
LCATP04180 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.22■□□□□ 0.19
LCATP04180 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
LCATP04180 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.22■□□□□ 0.19
LCATP04180 AP000525.1-201ENST00000608286 694 ntBASIC16.22■□□□□ 0.19
LCATP04180 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.22■□□□□ 0.19
LCATP04180 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LCATP04180 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.22■□□□□ 0.19
LCATP04180 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LCATP04180 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LCATP04180 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LCATP04180 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LCATP04180 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LCATP04180 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LCATP04180 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.22■□□□□ 0.19
LCATP04180 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LCATP04180 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LCATP04180 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.22■□□□□ 0.19
LCATP04180 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LCATP04180 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
LCATP04180 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LCATP04180 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
LCATP04180 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.21■□□□□ 0.19
LCATP04180 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LCATP04180 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.21■□□□□ 0.19
LCATP04180 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LCATP04180 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LCATP04180 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LCATP04180 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LCATP04180 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LCATP04180 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LCATP04180 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LCATP04180 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.21■□□□□ 0.19
LCATP04180 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.21■□□□□ 0.19
LCATP04180 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LCATP04180 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LCATP04180 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LCATP04180 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LCATP04180 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.21■□□□□ 0.19
LCATP04180 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
LCATP04180 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LCATP04180 AC079598.2-202ENST00000546624 1451 ntBASIC16.21■□□□□ 0.19
LCATP04180 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LCATP04180 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.21■□□□□ 0.18
LCATP04180 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
LCATP04180 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LCATP04180 GPAT2P1-201ENST00000444924 1672 ntBASIC16.21■□□□□ 0.18
LCATP04180 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LCATP04180 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LCATP04180 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
LCATP04180 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LCATP04180 AC112777.1-201ENST00000540175 1423 ntBASIC16.2■□□□□ 0.18
LCATP04180 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LCATP04180 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
LCATP04180 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
LCATP04180 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LCATP04180 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LCATP04180 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LCATP04180 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
LCATP04180 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
LCATP04180 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LCATP04180 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
LCATP04180 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LCATP04180 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.2■□□□□ 0.18
LCATP04180 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
LCATP04180 MIR1238-201ENST00000408483 83 ntBASIC16.2■□□□□ 0.18
LCATP04180 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.2■□□□□ 0.18
LCATP04180 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.2■□□□□ 0.18
LCATP04180 AL390955.1-201ENST00000428694 934 ntBASIC16.2■□□□□ 0.18
LCATP04180 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.2■□□□□ 0.18
LCATP04180 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.2■□□□□ 0.18
LCATP04180 MIR4497-201ENST00000583208 89 ntBASIC16.2■□□□□ 0.18
LCATP04180 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LCATP04180 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.2■□□□□ 0.18
LCATP04180 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LCATP04180 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.2■□□□□ 0.18
LCATP04180 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
LCATP04180 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.2■□□□□ 0.18
LCATP04180 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LCATP04180 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LCATP04180 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LCATP04180 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LCATP04180 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.19■□□□□ 0.18
LCATP04180 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
LCATP04180 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCATP04180 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCATP04180 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LCATP04180 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCATP04180 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCATP04180 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms