Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 KRT8P26-201ENST00000534154 1276 ntBASIC17.3■□□□□ 0.36
PDGFAP04085 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.3■□□□□ 0.36
PDGFAP04085 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.3■□□□□ 0.36
PDGFAP04085 IFNL4P1-201ENST00000607083 540 ntBASIC17.3■□□□□ 0.36
PDGFAP04085 AL732292.2-201ENST00000609649 430 ntBASIC17.3■□□□□ 0.36
PDGFAP04085 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.3■□□□□ 0.36
PDGFAP04085 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFAP04085 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFAP04085 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFAP04085 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFAP04085 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFAP04085 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFAP04085 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFAP04085 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFAP04085 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFAP04085 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PDGFAP04085 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PDGFAP04085 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFAP04085 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PDGFAP04085 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PDGFAP04085 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFAP04085 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.29■□□□□ 0.36
PDGFAP04085 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFAP04085 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.29■□□□□ 0.36
PDGFAP04085 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PDGFAP04085 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PDGFAP04085 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFAP04085 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PDGFAP04085 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFAP04085 FAAHP1-202ENST00000446499 1238 ntBASIC17.29■□□□□ 0.36
PDGFAP04085 EMBP1-201ENST00000458200 901 ntBASIC17.29■□□□□ 0.36
PDGFAP04085 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
PDGFAP04085 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.29■□□□□ 0.36
PDGFAP04085 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.29■□□□□ 0.36
PDGFAP04085 AL157888.1-201ENST00000631930 593 ntBASIC17.29■□□□□ 0.36
PDGFAP04085 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFAP04085 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PDGFAP04085 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFAP04085 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.29■□□□□ 0.36
PDGFAP04085 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFAP04085 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFAP04085 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFAP04085 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.28■□□□□ 0.36
PDGFAP04085 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.28■□□□□ 0.36
PDGFAP04085 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.28■□□□□ 0.36
PDGFAP04085 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFAP04085 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PDGFAP04085 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFAP04085 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.28■□□□□ 0.36
PDGFAP04085 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.28■□□□□ 0.36
PDGFAP04085 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFAP04085 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFAP04085 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFAP04085 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
PDGFAP04085 NUS1P1-201ENST00000446295 882 ntBASIC17.28■□□□□ 0.36
PDGFAP04085 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
PDGFAP04085 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PDGFAP04085 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PDGFAP04085 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.28■□□□□ 0.36
PDGFAP04085 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.28■□□□□ 0.36
PDGFAP04085 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PDGFAP04085 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.28■□□□□ 0.36
PDGFAP04085 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.28■□□□□ 0.36
PDGFAP04085 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
PDGFAP04085 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFAP04085 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFAP04085 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFAP04085 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.28■□□□□ 0.36
PDGFAP04085 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
PDGFAP04085 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFAP04085 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFAP04085 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFAP04085 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFAP04085 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PDGFAP04085 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.28■□□□□ 0.36
PDGFAP04085 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFAP04085 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.28■□□□□ 0.36
PDGFAP04085 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.28■□□□□ 0.36
PDGFAP04085 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
PDGFAP04085 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDGFAP04085 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDGFAP04085 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PDGFAP04085 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDGFAP04085 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDGFAP04085 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.27■□□□□ 0.36
PDGFAP04085 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDGFAP04085 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDGFAP04085 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
PDGFAP04085 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDGFAP04085 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDGFAP04085 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
PDGFAP04085 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PDGFAP04085 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.27■□□□□ 0.36
PDGFAP04085 CHCHD2P8-201ENST00000429873 447 ntBASIC17.27■□□□□ 0.36
PDGFAP04085 HLA-F-220ENST00000434407 884 ntBASIC17.27■□□□□ 0.36
PDGFAP04085 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.27■□□□□ 0.36
PDGFAP04085 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.27■□□□□ 0.36
PDGFAP04085 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.27■□□□□ 0.36
PDGFAP04085 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.27■□□□□ 0.36
PDGFAP04085 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms