Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.97■□□□□ 0.79
TIMP1P01033 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.97■□□□□ 0.79
TIMP1P01033 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.97■□□□□ 0.79
TIMP1P01033 KRT18P41-201ENST00000518924 1277 ntBASIC19.97■□□□□ 0.79
TIMP1P01033 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.97■□□□□ 0.79
TIMP1P01033 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.97■□□□□ 0.79
TIMP1P01033 AC011467.2-201ENST00000598425 242 ntBASIC19.97■□□□□ 0.79
TIMP1P01033 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TIMP1P01033 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TIMP1P01033 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.97■□□□□ 0.79
TIMP1P01033 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TIMP1P01033 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TIMP1P01033 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TIMP1P01033 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.97■□□□□ 0.79
TIMP1P01033 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TIMP1P01033 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TIMP1P01033 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TIMP1P01033 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.96■□□□□ 0.79
TIMP1P01033 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TIMP1P01033 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TIMP1P01033 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TIMP1P01033 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TIMP1P01033 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TIMP1P01033 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TIMP1P01033 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TIMP1P01033 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TIMP1P01033 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.96■□□□□ 0.79
TIMP1P01033 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.96■□□□□ 0.79
TIMP1P01033 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.96■□□□□ 0.79
TIMP1P01033 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.96■□□□□ 0.79
TIMP1P01033 AL138831.2-201ENST00000606564 490 ntBASIC19.96■□□□□ 0.79
TIMP1P01033 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.96■□□□□ 0.79
TIMP1P01033 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TIMP1P01033 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
TIMP1P01033 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TIMP1P01033 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TIMP1P01033 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
TIMP1P01033 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
TIMP1P01033 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TIMP1P01033 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
TIMP1P01033 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TIMP1P01033 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TIMP1P01033 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TIMP1P01033 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TIMP1P01033 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TIMP1P01033 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TIMP1P01033 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TIMP1P01033 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TIMP1P01033 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.95■□□□□ 0.78
TIMP1P01033 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.95■□□□□ 0.78
TIMP1P01033 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TIMP1P01033 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.95■□□□□ 0.78
TIMP1P01033 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.95■□□□□ 0.78
TIMP1P01033 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.95■□□□□ 0.78
TIMP1P01033 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.95■□□□□ 0.78
TIMP1P01033 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.95■□□□□ 0.78
TIMP1P01033 AL356309.3-201ENST00000624132 1934 ntBASIC19.95■□□□□ 0.78
TIMP1P01033 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TIMP1P01033 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TIMP1P01033 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TIMP1P01033 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.95■□□□□ 0.78
TIMP1P01033 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TIMP1P01033 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TIMP1P01033 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TIMP1P01033 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.95■□□□□ 0.78
TIMP1P01033 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TIMP1P01033 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TIMP1P01033 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.95■□□□□ 0.78
TIMP1P01033 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TIMP1P01033 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TIMP1P01033 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
TIMP1P01033 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TIMP1P01033 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
TIMP1P01033 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TIMP1P01033 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TIMP1P01033 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TIMP1P01033 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TIMP1P01033 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TIMP1P01033 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
TIMP1P01033 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.94■□□□□ 0.78
TIMP1P01033 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TIMP1P01033 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TIMP1P01033 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.94■□□□□ 0.78
TIMP1P01033 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TIMP1P01033 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
TIMP1P01033 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.94■□□□□ 0.78
TIMP1P01033 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.94■□□□□ 0.78
TIMP1P01033 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.94■□□□□ 0.78
TIMP1P01033 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.94■□□□□ 0.78
TIMP1P01033 AC134684.3-201ENST00000641758 218 ntBASIC19.94■□□□□ 0.78
TIMP1P01033 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
TIMP1P01033 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TIMP1P01033 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.94■□□□□ 0.78
TIMP1P01033 AC112907.3-201ENST00000577781 2400 ntBASIC19.94■□□□□ 0.78
TIMP1P01033 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TIMP1P01033 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TIMP1P01033 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.94■□□□□ 0.78
TIMP1P01033 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TIMP1P01033 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
TIMP1P01033 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms