Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MT-CO1P00395 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MT-CO1P00395 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
MT-CO1P00395 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
MT-CO1P00395 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MT-CO1P00395 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.98■□□□□ 0.63
MT-CO1P00395 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MT-CO1P00395 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
MT-CO1P00395 AC006333.2-201ENST00000607957 2099 ntBASIC18.97■□□□□ 0.63
MT-CO1P00395 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MT-CO1P00395 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
MT-CO1P00395 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MT-CO1P00395 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.97■□□□□ 0.63
MT-CO1P00395 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MT-CO1P00395 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
MT-CO1P00395 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
MT-CO1P00395 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
MT-CO1P00395 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MT-CO1P00395 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MT-CO1P00395 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
MT-CO1P00395 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MT-CO1P00395 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MT-CO1P00395 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MT-CO1P00395 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MT-CO1P00395 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
MT-CO1P00395 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.97■□□□□ 0.63
MT-CO1P00395 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MT-CO1P00395 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
MT-CO1P00395 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MT-CO1P00395 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MT-CO1P00395 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MT-CO1P00395 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
MT-CO1P00395 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MT-CO1P00395 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MT-CO1P00395 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MT-CO1P00395 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MT-CO1P00395 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MT-CO1P00395 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MT-CO1P00395 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MT-CO1P00395 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
MT-CO1P00395 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MT-CO1P00395 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.96■□□□□ 0.63
MT-CO1P00395 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MT-CO1P00395 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.96■□□□□ 0.63
MT-CO1P00395 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MT-CO1P00395 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MT-CO1P00395 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.96■□□□□ 0.63
MT-CO1P00395 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.96■□□□□ 0.63
MT-CO1P00395 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
MT-CO1P00395 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MT-CO1P00395 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.96■□□□□ 0.63
MT-CO1P00395 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MT-CO1P00395 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
MT-CO1P00395 STARP1-201ENST00000397973 869 ntBASIC18.96■□□□□ 0.63
MT-CO1P00395 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MT-CO1P00395 KRT18P23-201ENST00000435622 1283 ntBASIC18.96■□□□□ 0.63
MT-CO1P00395 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MT-CO1P00395 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
MT-CO1P00395 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.96■□□□□ 0.63
MT-CO1P00395 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.96■□□□□ 0.63
MT-CO1P00395 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.96■□□□□ 0.63
MT-CO1P00395 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.96■□□□□ 0.63
MT-CO1P00395 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.96■□□□□ 0.63
MT-CO1P00395 AC083906.6-201ENST00000641366 219 ntBASIC18.96■□□□□ 0.63
MT-CO1P00395 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.96■□□□□ 0.63
MT-CO1P00395 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MT-CO1P00395 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MT-CO1P00395 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MT-CO1P00395 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MT-CO1P00395 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
MT-CO1P00395 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MT-CO1P00395 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
MT-CO1P00395 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
MT-CO1P00395 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
MT-CO1P00395 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MT-CO1P00395 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MT-CO1P00395 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MT-CO1P00395 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MT-CO1P00395 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
MT-CO1P00395 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MT-CO1P00395 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MT-CO1P00395 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MT-CO1P00395 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.95■□□□□ 0.62
MT-CO1P00395 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MT-CO1P00395 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MT-CO1P00395 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.95■□□□□ 0.62
MT-CO1P00395 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.95■□□□□ 0.62
MT-CO1P00395 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.95■□□□□ 0.62
MT-CO1P00395 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.95■□□□□ 0.62
MT-CO1P00395 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.95■□□□□ 0.62
MT-CO1P00395 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
MT-CO1P00395 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
MT-CO1P00395 HYMAI.1-201ENST00000620949 238 ntBASIC18.95■□□□□ 0.62
MT-CO1P00395 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.95■□□□□ 0.62
MT-CO1P00395 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
MT-CO1P00395 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
MT-CO1P00395 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MT-CO1P00395 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
MT-CO1P00395 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MT-CO1P00395 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms