Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1BO75841 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1BO75841 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1BO75841 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1BO75841 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.16■□□□□ 0.18
UPK1BO75841 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1BO75841 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1BO75841 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
UPK1BO75841 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
UPK1BO75841 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1BO75841 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
UPK1BO75841 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
UPK1BO75841 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1BO75841 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1BO75841 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1BO75841 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1BO75841 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.16■□□□□ 0.18
UPK1BO75841 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.16■□□□□ 0.18
UPK1BO75841 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.16■□□□□ 0.18
UPK1BO75841 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
UPK1BO75841 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
UPK1BO75841 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UPK1BO75841 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
UPK1BO75841 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UPK1BO75841 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UPK1BO75841 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
UPK1BO75841 AC008741.2-201ENST00000612792 3115 ntBASIC16.15■□□□□ 0.18
UPK1BO75841 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
UPK1BO75841 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
UPK1BO75841 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
UPK1BO75841 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
UPK1BO75841 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
UPK1BO75841 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.15■□□□□ 0.18
UPK1BO75841 AC012414.1-201ENST00000556676 535 ntBASIC16.15■□□□□ 0.18
UPK1BO75841 SLC7A5P1-201ENST00000568957 537 ntBASIC16.15■□□□□ 0.18
UPK1BO75841 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.15■□□□□ 0.18
UPK1BO75841 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.15■□□□□ 0.18
UPK1BO75841 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.15■□□□□ 0.18
UPK1BO75841 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.15■□□□□ 0.18
UPK1BO75841 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
UPK1BO75841 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.15■□□□□ 0.18
UPK1BO75841 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UPK1BO75841 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UPK1BO75841 AGGF1P2-201ENST00000426656 2106 ntBASIC16.15■□□□□ 0.18
UPK1BO75841 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
UPK1BO75841 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.14■□□□□ 0.18
UPK1BO75841 AC008556.1-201ENST00000610908 2040 ntBASIC16.14■□□□□ 0.17
UPK1BO75841 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
UPK1BO75841 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UPK1BO75841 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
UPK1BO75841 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.14■□□□□ 0.17
UPK1BO75841 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UPK1BO75841 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UPK1BO75841 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
UPK1BO75841 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UPK1BO75841 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UPK1BO75841 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
UPK1BO75841 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
UPK1BO75841 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UPK1BO75841 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UPK1BO75841 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UPK1BO75841 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
UPK1BO75841 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.14■□□□□ 0.17
UPK1BO75841 MFSD11-216ENST00000590393 1141 ntBASIC16.14■□□□□ 0.17
UPK1BO75841 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
UPK1BO75841 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UPK1BO75841 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UPK1BO75841 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.14■□□□□ 0.17
UPK1BO75841 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.14■□□□□ 0.17
UPK1BO75841 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
UPK1BO75841 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
UPK1BO75841 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
UPK1BO75841 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UPK1BO75841 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
UPK1BO75841 LINC02199-201ENST00000506655 2702 ntBASIC16.14■□□□□ 0.17
UPK1BO75841 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
UPK1BO75841 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.14■□□□□ 0.17
UPK1BO75841 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
UPK1BO75841 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.14■□□□□ 0.17
UPK1BO75841 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.14■□□□□ 0.17
UPK1BO75841 MTMR9LP-203ENST00000426597 1545 ntBASIC16.14■□□□□ 0.17
UPK1BO75841 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.14■□□□□ 0.17
UPK1BO75841 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.14■□□□□ 0.17
UPK1BO75841 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
UPK1BO75841 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UPK1BO75841 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UPK1BO75841 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UPK1BO75841 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
UPK1BO75841 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UPK1BO75841 AC106886.4-201ENST00000623557 2502 ntBASIC16.13■□□□□ 0.17
UPK1BO75841 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UPK1BO75841 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
UPK1BO75841 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
UPK1BO75841 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UPK1BO75841 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.13■□□□□ 0.17
UPK1BO75841 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UPK1BO75841 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.13■□□□□ 0.17
UPK1BO75841 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UPK1BO75841 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC16.13■□□□□ 0.17
UPK1BO75841 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms