Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CLDN11O75508 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN11O75508 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN11O75508 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN11O75508 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN11O75508 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CLDN11O75508 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.9■□□□□ 0.62
CLDN11O75508 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN11O75508 TNXA-203ENST00000507684 2038 ntBASIC18.9■□□□□ 0.62
CLDN11O75508 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN11O75508 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
CLDN11O75508 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.89■□□□□ 0.62
CLDN11O75508 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
CLDN11O75508 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CLDN11O75508 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN11O75508 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN11O75508 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.89■□□□□ 0.61
CLDN11O75508 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN11O75508 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.89■□□□□ 0.61
CLDN11O75508 SPDYE13P-201ENST00000445314 798 ntBASIC18.89■□□□□ 0.61
CLDN11O75508 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN11O75508 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.89■□□□□ 0.61
CLDN11O75508 AC091076.1-201ENST00000610741 619 ntBASIC18.89■□□□□ 0.61
CLDN11O75508 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.89■□□□□ 0.61
CLDN11O75508 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.89■□□□□ 0.61
CLDN11O75508 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CLDN11O75508 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CLDN11O75508 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.89■□□□□ 0.61
CLDN11O75508 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN11O75508 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.89■□□□□ 0.61
CLDN11O75508 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN11O75508 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
CLDN11O75508 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN11O75508 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN11O75508 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN11O75508 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN11O75508 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN11O75508 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CLDN11O75508 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN11O75508 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN11O75508 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CLDN11O75508 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN11O75508 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CLDN11O75508 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN11O75508 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CLDN11O75508 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.88■□□□□ 0.61
CLDN11O75508 PCED1CP-201ENST00000419887 785 ntBASIC18.88■□□□□ 0.61
CLDN11O75508 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN11O75508 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN11O75508 AC005332.1-201ENST00000577698 1310 ntBASIC18.88■□□□□ 0.61
CLDN11O75508 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN11O75508 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CLDN11O75508 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN11O75508 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN11O75508 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CLDN11O75508 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN11O75508 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.87■□□□□ 0.61
CLDN11O75508 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN11O75508 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN11O75508 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN11O75508 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.87■□□□□ 0.61
CLDN11O75508 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN11O75508 MIR662-201ENST00000384847 95 ntBASIC18.87■□□□□ 0.61
CLDN11O75508 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN11O75508 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.87■□□□□ 0.61
CLDN11O75508 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN11O75508 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.87■□□□□ 0.61
CLDN11O75508 AL358472.4-201ENST00000633140 710 ntBASIC18.87■□□□□ 0.61
CLDN11O75508 AP000550.4-202ENST00000639755 178 ntBASIC18.87■□□□□ 0.61
CLDN11O75508 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN11O75508 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN11O75508 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN11O75508 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN11O75508 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN11O75508 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.86■□□□□ 0.61
CLDN11O75508 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN11O75508 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN11O75508 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN11O75508 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.86■□□□□ 0.61
CLDN11O75508 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN11O75508 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN11O75508 AL645929.1-201ENST00000420084 975 ntBASIC18.86■□□□□ 0.61
CLDN11O75508 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN11O75508 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CLDN11O75508 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
CLDN11O75508 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN11O75508 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN11O75508 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.86■□□□□ 0.61
CLDN11O75508 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.86■□□□□ 0.61
CLDN11O75508 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN11O75508 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN11O75508 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CLDN11O75508 SDHAP2-201ENST00000455183 2001 ntBASIC18.86■□□□□ 0.61
CLDN11O75508 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN11O75508 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN11O75508 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.85■□□□□ 0.61
CLDN11O75508 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.85■□□□□ 0.61
CLDN11O75508 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.85■□□□□ 0.61
CLDN11O75508 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN11O75508 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms