Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
GPC4O75487 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
GPC4O75487 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GPC4O75487 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
GPC4O75487 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.58■□□□□ 0.56
GPC4O75487 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
GPC4O75487 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GPC4O75487 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
GPC4O75487 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.58■□□□□ 0.56
GPC4O75487 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
GPC4O75487 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.58■□□□□ 0.56
GPC4O75487 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
GPC4O75487 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.58■□□□□ 0.56
GPC4O75487 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GPC4O75487 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GPC4O75487 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GPC4O75487 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
GPC4O75487 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GPC4O75487 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GPC4O75487 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GPC4O75487 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.57■□□□□ 0.56
GPC4O75487 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
GPC4O75487 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GPC4O75487 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
GPC4O75487 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.57■□□□□ 0.56
GPC4O75487 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GPC4O75487 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GPC4O75487 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.57■□□□□ 0.56
GPC4O75487 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
GPC4O75487 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GPC4O75487 CA15P1-201ENST00000481698 905 ntBASIC18.57■□□□□ 0.56
GPC4O75487 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
GPC4O75487 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GPC4O75487 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.57■□□□□ 0.56
GPC4O75487 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.57■□□□□ 0.56
GPC4O75487 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GPC4O75487 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GPC4O75487 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GPC4O75487 AL512353.2-201ENST00000448759 1962 ntBASIC18.57■□□□□ 0.56
GPC4O75487 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GPC4O75487 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GPC4O75487 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GPC4O75487 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GPC4O75487 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GPC4O75487 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GPC4O75487 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
GPC4O75487 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
GPC4O75487 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GPC4O75487 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GPC4O75487 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.56■□□□□ 0.56
GPC4O75487 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
GPC4O75487 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
GPC4O75487 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
GPC4O75487 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GPC4O75487 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GPC4O75487 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
GPC4O75487 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.56■□□□□ 0.56
GPC4O75487 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
GPC4O75487 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.56■□□□□ 0.56
GPC4O75487 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.56■□□□□ 0.56
GPC4O75487 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
GPC4O75487 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GPC4O75487 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
GPC4O75487 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.56■□□□□ 0.56
GPC4O75487 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GPC4O75487 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
GPC4O75487 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
GPC4O75487 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
GPC4O75487 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GPC4O75487 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.55■□□□□ 0.56
GPC4O75487 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
GPC4O75487 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
GPC4O75487 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.55■□□□□ 0.56
GPC4O75487 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GPC4O75487 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.55■□□□□ 0.56
GPC4O75487 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GPC4O75487 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
GPC4O75487 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.55■□□□□ 0.56
GPC4O75487 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GPC4O75487 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GPC4O75487 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
GPC4O75487 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
GPC4O75487 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GPC4O75487 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GPC4O75487 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.55■□□□□ 0.56
GPC4O75487 MIR1238-201ENST00000408483 83 ntBASIC18.55■□□□□ 0.56
GPC4O75487 AL390955.1-201ENST00000428694 934 ntBASIC18.55■□□□□ 0.56
GPC4O75487 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
GPC4O75487 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.55■□□□□ 0.56
GPC4O75487 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GPC4O75487 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GPC4O75487 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.55■□□□□ 0.56
GPC4O75487 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GPC4O75487 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
GPC4O75487 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
GPC4O75487 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GPC4O75487 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GPC4O75487 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.54■□□□□ 0.56
GPC4O75487 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GPC4O75487 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms