Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.68
BRD4O60885 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
BRD4O60885 ENSA-205ENST00000361532 792 ntTSL 2 BASIC25.57■■□□□ 1.68
BRD4O60885 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
BRD4O60885 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC25.57■■□□□ 1.68
BRD4O60885 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC25.57■■□□□ 1.68
BRD4O60885 AC012615.1-201ENST00000565797 1299 ntBASIC25.57■■□□□ 1.68
BRD4O60885 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC25.57■■□□□ 1.68
BRD4O60885 IL11-204ENST00000590625 1028 ntTSL 2 BASIC25.57■■□□□ 1.68
BRD4O60885 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
BRD4O60885 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
BRD4O60885 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC25.57■■□□□ 1.68
BRD4O60885 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
BRD4O60885 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC25.57■■□□□ 1.68
BRD4O60885 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC25.57■■□□□ 1.68
BRD4O60885 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
BRD4O60885 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
BRD4O60885 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC25.57■■□□□ 1.68
BRD4O60885 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC25.57■■□□□ 1.68
BRD4O60885 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC25.57■■□□□ 1.68
BRD4O60885 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC25.56■■□□□ 1.68
BRD4O60885 PVRIG2P-201ENST00000435460 978 ntBASIC25.56■■□□□ 1.68
BRD4O60885 KRT18P23-201ENST00000435622 1283 ntBASIC25.56■■□□□ 1.68
BRD4O60885 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
BRD4O60885 RNF126P1-202ENST00000569893 925 ntBASIC25.56■■□□□ 1.68
BRD4O60885 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
BRD4O60885 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC25.56■■□□□ 1.68
BRD4O60885 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
BRD4O60885 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
BRD4O60885 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
BRD4O60885 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC25.56■■□□□ 1.68
BRD4O60885 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
BRD4O60885 RCC2P3-201ENST00000418112 1537 ntBASIC25.56■■□□□ 1.68
BRD4O60885 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
BRD4O60885 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC25.56■■□□□ 1.68
BRD4O60885 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC25.56■■□□□ 1.68
BRD4O60885 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC25.56■■□□□ 1.68
BRD4O60885 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC25.56■■□□□ 1.68
BRD4O60885 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
BRD4O60885 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC25.56■■□□□ 1.68
BRD4O60885 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
BRD4O60885 UNC93B7-201ENST00000509439 705 ntBASIC25.56■■□□□ 1.68
BRD4O60885 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
BRD4O60885 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
BRD4O60885 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC25.55■■□□□ 1.68
BRD4O60885 KATNBL1P6-202ENST00000562413 1466 ntBASIC25.55■■□□□ 1.68
BRD4O60885 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC25.55■■□□□ 1.68
BRD4O60885 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
BRD4O60885 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC25.55■■□□□ 1.68
BRD4O60885 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
BRD4O60885 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC25.55■■□□□ 1.68
BRD4O60885 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
BRD4O60885 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
BRD4O60885 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC25.55■■□□□ 1.68
BRD4O60885 IFNL4P1-201ENST00000607083 540 ntBASIC25.55■■□□□ 1.68
BRD4O60885 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC25.55■■□□□ 1.68
BRD4O60885 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
BRD4O60885 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
BRD4O60885 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
BRD4O60885 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
BRD4O60885 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
BRD4O60885 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
BRD4O60885 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
BRD4O60885 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
BRD4O60885 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
BRD4O60885 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
BRD4O60885 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC25.54■■□□□ 1.68
BRD4O60885 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
BRD4O60885 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC25.54■■□□□ 1.68
BRD4O60885 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC25.54■■□□□ 1.68
BRD4O60885 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
BRD4O60885 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
BRD4O60885 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
BRD4O60885 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC25.54■■□□□ 1.68
BRD4O60885 KRT8P10-201ENST00000450021 1447 ntBASIC25.54■■□□□ 1.68
BRD4O60885 KRT18P1-202ENST00000452408 1331 ntBASIC25.54■■□□□ 1.68
BRD4O60885 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
BRD4O60885 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
BRD4O60885 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
BRD4O60885 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC25.54■■□□□ 1.68
BRD4O60885 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
BRD4O60885 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC25.54■■□□□ 1.68
BRD4O60885 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
BRD4O60885 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
BRD4O60885 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC25.53■■□□□ 1.68
BRD4O60885 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
BRD4O60885 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
BRD4O60885 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
BRD4O60885 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
BRD4O60885 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC25.53■■□□□ 1.68
BRD4O60885 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
BRD4O60885 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
BRD4O60885 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC25.53■■□□□ 1.68
BRD4O60885 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
BRD4O60885 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
BRD4O60885 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC25.53■■□□□ 1.68
BRD4O60885 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
BRD4O60885 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC25.53■■□□□ 1.68
BRD4O60885 MIR564-202ENST00000385049 94 ntBASIC25.53■■□□□ 1.68
BRD4O60885 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC25.53■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms