Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
ZIC3O60481 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.64■□□□□ 0.25
ZIC3O60481 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ZIC3O60481 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZIC3O60481 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZIC3O60481 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZIC3O60481 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.64■□□□□ 0.25
ZIC3O60481 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZIC3O60481 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.64■□□□□ 0.25
ZIC3O60481 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
ZIC3O60481 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ZIC3O60481 MIR662-201ENST00000384847 95 ntBASIC16.64■□□□□ 0.25
ZIC3O60481 PCED1CP-201ENST00000419887 785 ntBASIC16.64■□□□□ 0.25
ZIC3O60481 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZIC3O60481 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.64■□□□□ 0.25
ZIC3O60481 VENTXP5-201ENST00000523979 775 ntBASIC16.64■□□□□ 0.25
ZIC3O60481 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.64■□□□□ 0.25
ZIC3O60481 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.64■□□□□ 0.25
ZIC3O60481 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.64■□□□□ 0.25
ZIC3O60481 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ZIC3O60481 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZIC3O60481 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.64■□□□□ 0.25
ZIC3O60481 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.64■□□□□ 0.25
ZIC3O60481 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.64■□□□□ 0.25
ZIC3O60481 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZIC3O60481 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZIC3O60481 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZIC3O60481 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZIC3O60481 AC005082.1-201ENST00000413042 2259 ntBASIC16.63■□□□□ 0.25
ZIC3O60481 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ZIC3O60481 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
ZIC3O60481 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZIC3O60481 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ZIC3O60481 AC126763.1-201ENST00000552015 2118 ntBASIC16.63■□□□□ 0.25
ZIC3O60481 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZIC3O60481 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
ZIC3O60481 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZIC3O60481 AC009102.3-201ENST00000623118 1491 ntBASIC16.63■□□□□ 0.25
ZIC3O60481 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ZIC3O60481 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.63■□□□□ 0.25
ZIC3O60481 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZIC3O60481 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZIC3O60481 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ZIC3O60481 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZIC3O60481 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ZIC3O60481 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.63■□□□□ 0.25
ZIC3O60481 AC116407.4-201ENST00000623319 1061 ntBASIC16.63■□□□□ 0.25
ZIC3O60481 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZIC3O60481 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.63■□□□□ 0.25
ZIC3O60481 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZIC3O60481 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZIC3O60481 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZIC3O60481 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.62■□□□□ 0.25
ZIC3O60481 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.62■□□□□ 0.25
ZIC3O60481 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZIC3O60481 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
ZIC3O60481 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
ZIC3O60481 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
ZIC3O60481 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZIC3O60481 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.62■□□□□ 0.25
ZIC3O60481 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.62■□□□□ 0.25
ZIC3O60481 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZIC3O60481 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZIC3O60481 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
ZIC3O60481 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.62■□□□□ 0.25
ZIC3O60481 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZIC3O60481 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.62■□□□□ 0.25
ZIC3O60481 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
ZIC3O60481 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZIC3O60481 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.62■□□□□ 0.25
ZIC3O60481 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
ZIC3O60481 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.62■□□□□ 0.25
ZIC3O60481 AC091076.1-201ENST00000610741 619 ntBASIC16.62■□□□□ 0.25
ZIC3O60481 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.62■□□□□ 0.25
ZIC3O60481 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
ZIC3O60481 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZIC3O60481 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZIC3O60481 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
ZIC3O60481 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.62■□□□□ 0.25
ZIC3O60481 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZIC3O60481 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZIC3O60481 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZIC3O60481 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZIC3O60481 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZIC3O60481 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZIC3O60481 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZIC3O60481 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.61■□□□□ 0.25
ZIC3O60481 AC004408.2-201ENST00000623613 2777 ntBASIC16.61■□□□□ 0.25
ZIC3O60481 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.61■□□□□ 0.25
ZIC3O60481 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZIC3O60481 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
ZIC3O60481 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZIC3O60481 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.61■□□□□ 0.25
ZIC3O60481 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZIC3O60481 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZIC3O60481 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZIC3O60481 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZIC3O60481 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.61■□□□□ 0.25
ZIC3O60481 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.61■□□□□ 0.25
ZIC3O60481 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms