Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PEX1O43933 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PEX1O43933 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PEX1O43933 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.06■□□□□ 0.48
PEX1O43933 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PEX1O43933 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.06■□□□□ 0.48
PEX1O43933 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PEX1O43933 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.06■□□□□ 0.48
PEX1O43933 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.06■□□□□ 0.48
PEX1O43933 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.06■□□□□ 0.48
PEX1O43933 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PEX1O43933 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.06■□□□□ 0.48
PEX1O43933 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PEX1O43933 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PEX1O43933 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PEX1O43933 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PEX1O43933 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PEX1O43933 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PEX1O43933 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PEX1O43933 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PEX1O43933 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PEX1O43933 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PEX1O43933 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PEX1O43933 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PEX1O43933 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PEX1O43933 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PEX1O43933 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PEX1O43933 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.06■□□□□ 0.48
PEX1O43933 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PEX1O43933 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PEX1O43933 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PEX1O43933 GNAS-203ENST00000306120 1878 ntBASIC18.05■□□□□ 0.48
PEX1O43933 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.05■□□□□ 0.48
PEX1O43933 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.05■□□□□ 0.48
PEX1O43933 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.05■□□□□ 0.48
PEX1O43933 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PEX1O43933 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
PEX1O43933 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PEX1O43933 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PEX1O43933 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PEX1O43933 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PEX1O43933 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.05■□□□□ 0.48
PEX1O43933 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PEX1O43933 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.05■□□□□ 0.48
PEX1O43933 AC073912.3-201ENST00000624414 853 ntBASIC18.05■□□□□ 0.48
PEX1O43933 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PEX1O43933 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PEX1O43933 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PEX1O43933 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PEX1O43933 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PEX1O43933 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PEX1O43933 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PEX1O43933 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
PEX1O43933 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.05■□□□□ 0.48
PEX1O43933 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.05■□□□□ 0.48
PEX1O43933 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PEX1O43933 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PEX1O43933 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.05■□□□□ 0.48
PEX1O43933 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.05■□□□□ 0.48
PEX1O43933 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PEX1O43933 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PEX1O43933 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PEX1O43933 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PEX1O43933 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PEX1O43933 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.04■□□□□ 0.48
PEX1O43933 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PEX1O43933 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PEX1O43933 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PEX1O43933 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PEX1O43933 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PEX1O43933 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.04■□□□□ 0.48
PEX1O43933 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.04■□□□□ 0.48
PEX1O43933 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
PEX1O43933 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PEX1O43933 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
PEX1O43933 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PEX1O43933 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.04■□□□□ 0.48
PEX1O43933 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.04■□□□□ 0.48
PEX1O43933 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.04■□□□□ 0.48
PEX1O43933 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.04■□□□□ 0.48
PEX1O43933 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PEX1O43933 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PEX1O43933 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.04■□□□□ 0.48
PEX1O43933 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
PEX1O43933 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PEX1O43933 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PEX1O43933 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
PEX1O43933 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PEX1O43933 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PEX1O43933 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PEX1O43933 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PEX1O43933 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PEX1O43933 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
PEX1O43933 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PEX1O43933 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PEX1O43933 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PEX1O43933 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
PEX1O43933 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.03■□□□□ 0.48
PEX1O43933 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.03■□□□□ 0.48
PEX1O43933 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms