Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 AC133561.5-201ENST00000635547 218 ntBASIC16.5■□□□□ 0.23
TRAF3IP2O43734 AC097493.4-201ENST00000641197 219 ntBASIC16.5■□□□□ 0.23
TRAF3IP2O43734 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAF3IP2O43734 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAF3IP2O43734 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAF3IP2O43734 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.49■□□□□ 0.23
TRAF3IP2O43734 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAF3IP2O43734 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAF3IP2O43734 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAF3IP2O43734 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAF3IP2O43734 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAF3IP2O43734 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAF3IP2O43734 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRAF3IP2O43734 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAF3IP2O43734 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
TRAF3IP2O43734 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAF3IP2O43734 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAF3IP2O43734 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAF3IP2O43734 ECEL1P3-201ENST00000427961 737 ntBASIC16.49■□□□□ 0.23
TRAF3IP2O43734 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRAF3IP2O43734 SLC25A3P1-201ENST00000443844 931 ntBASIC16.49■□□□□ 0.23
TRAF3IP2O43734 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAF3IP2O43734 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.49■□□□□ 0.23
TRAF3IP2O43734 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.49■□□□□ 0.23
TRAF3IP2O43734 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
TRAF3IP2O43734 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.49■□□□□ 0.23
TRAF3IP2O43734 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.49■□□□□ 0.23
TRAF3IP2O43734 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAF3IP2O43734 AC112497.1-201ENST00000624824 639 ntBASIC16.49■□□□□ 0.23
TRAF3IP2O43734 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
TRAF3IP2O43734 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAF3IP2O43734 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAF3IP2O43734 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAF3IP2O43734 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAF3IP2O43734 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.49■□□□□ 0.23
TRAF3IP2O43734 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TRAF3IP2O43734 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
TRAF3IP2O43734 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAF3IP2O43734 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TRAF3IP2O43734 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAF3IP2O43734 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TRAF3IP2O43734 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAF3IP2O43734 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAF3IP2O43734 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAF3IP2O43734 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAF3IP2O43734 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAF3IP2O43734 NEFHP1-201ENST00000412845 2629 ntBASIC16.48■□□□□ 0.23
TRAF3IP2O43734 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TRAF3IP2O43734 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRAF3IP2O43734 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
TRAF3IP2O43734 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAF3IP2O43734 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
TRAF3IP2O43734 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAF3IP2O43734 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.48■□□□□ 0.23
TRAF3IP2O43734 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
TRAF3IP2O43734 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAF3IP2O43734 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAF3IP2O43734 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAF3IP2O43734 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TRAF3IP2O43734 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAF3IP2O43734 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAF3IP2O43734 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAF3IP2O43734 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAF3IP2O43734 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TRAF3IP2O43734 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRAF3IP2O43734 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRAF3IP2O43734 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRAF3IP2O43734 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP2O43734 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAF3IP2O43734 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP2O43734 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP2O43734 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP2O43734 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP2O43734 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP2O43734 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP2O43734 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP2O43734 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAF3IP2O43734 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP2O43734 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAF3IP2O43734 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.47■□□□□ 0.23
TRAF3IP2O43734 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAF3IP2O43734 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP2O43734 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAF3IP2O43734 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP2O43734 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP2O43734 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms