Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.22■□□□□ 0.67
MSI1O43347 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MSI1O43347 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
MSI1O43347 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MSI1O43347 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
MSI1O43347 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MSI1O43347 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MSI1O43347 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.22■□□□□ 0.67
MSI1O43347 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
MSI1O43347 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
MSI1O43347 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MSI1O43347 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
MSI1O43347 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.22■□□□□ 0.67
MSI1O43347 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MSI1O43347 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MSI1O43347 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MSI1O43347 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.21■□□□□ 0.67
MSI1O43347 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MSI1O43347 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MSI1O43347 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MSI1O43347 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MSI1O43347 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MSI1O43347 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
MSI1O43347 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.21■□□□□ 0.67
MSI1O43347 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.21■□□□□ 0.67
MSI1O43347 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.21■□□□□ 0.67
MSI1O43347 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.21■□□□□ 0.67
MSI1O43347 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
MSI1O43347 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.21■□□□□ 0.67
MSI1O43347 AL358472.4-201ENST00000633140 710 ntBASIC19.21■□□□□ 0.67
MSI1O43347 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MSI1O43347 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.21■□□□□ 0.67
MSI1O43347 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MSI1O43347 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MSI1O43347 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.21■□□□□ 0.67
MSI1O43347 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.21■□□□□ 0.67
MSI1O43347 AC004408.2-201ENST00000623613 2777 ntBASIC19.21■□□□□ 0.67
MSI1O43347 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MSI1O43347 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MSI1O43347 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MSI1O43347 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.2■□□□□ 0.66
MSI1O43347 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MSI1O43347 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MSI1O43347 MYLKP1-201ENST00000509077 1580 ntBASIC19.2■□□□□ 0.66
MSI1O43347 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
MSI1O43347 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
MSI1O43347 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
MSI1O43347 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MSI1O43347 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
MSI1O43347 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MSI1O43347 AP000593.1-201ENST00000393668 712 ntBASIC19.2■□□□□ 0.66
MSI1O43347 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
MSI1O43347 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.2■□□□□ 0.66
MSI1O43347 ZNF444P1-201ENST00000559497 298 ntBASIC19.2■□□□□ 0.66
MSI1O43347 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
MSI1O43347 AL163051.1-201ENST00000569214 1512 ntBASIC19.2■□□□□ 0.66
MSI1O43347 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.2■□□□□ 0.66
MSI1O43347 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MSI1O43347 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MSI1O43347 AC126763.1-201ENST00000552015 2118 ntBASIC19.19■□□□□ 0.66
MSI1O43347 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
MSI1O43347 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.19■□□□□ 0.66
MSI1O43347 AC112777.1-201ENST00000540175 1423 ntBASIC19.19■□□□□ 0.66
MSI1O43347 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
MSI1O43347 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MSI1O43347 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MSI1O43347 FAM86EP-206ENST00000510506 987 ntBASIC19.19■□□□□ 0.66
MSI1O43347 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.19■□□□□ 0.66
MSI1O43347 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
MSI1O43347 AL136038.4-201ENST00000603606 1261 ntBASIC19.19■□□□□ 0.66
MSI1O43347 AL121956.5-201ENST00000625261 221 ntBASIC19.19■□□□□ 0.66
MSI1O43347 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.19■□□□□ 0.66
MSI1O43347 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MSI1O43347 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MSI1O43347 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
MSI1O43347 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MSI1O43347 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.19■□□□□ 0.66
MSI1O43347 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.19■□□□□ 0.66
MSI1O43347 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MSI1O43347 AL391807.1-203ENST00000604392 2365 ntBASIC19.19■□□□□ 0.66
MSI1O43347 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.19■□□□□ 0.66
MSI1O43347 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MSI1O43347 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
MSI1O43347 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MSI1O43347 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MSI1O43347 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MSI1O43347 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
MSI1O43347 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.18■□□□□ 0.66
MSI1O43347 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MSI1O43347 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MSI1O43347 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MSI1O43347 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MSI1O43347 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.18■□□□□ 0.66
MSI1O43347 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.18■□□□□ 0.66
MSI1O43347 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
MSI1O43347 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.18■□□□□ 0.66
MSI1O43347 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MSI1O43347 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MSI1O43347 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.18■□□□□ 0.66
MSI1O43347 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms