Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC138932.1-201ENST00000534164 6830 ntBASIC18.63■□□□□ 0.57
TRIM38O00635 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM38O00635 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM38O00635 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM38O00635 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM38O00635 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM38O00635 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM38O00635 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM38O00635 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM38O00635 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.63■□□□□ 0.57
TRIM38O00635 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.63■□□□□ 0.57
TRIM38O00635 KRT126P-201ENST00000549467 1181 ntBASIC18.63■□□□□ 0.57
TRIM38O00635 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
TRIM38O00635 AL121894.2-201ENST00000602977 491 ntBASIC18.63■□□□□ 0.57
TRIM38O00635 AC116407.4-201ENST00000623319 1061 ntBASIC18.63■□□□□ 0.57
TRIM38O00635 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TRIM38O00635 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM38O00635 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM38O00635 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM38O00635 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM38O00635 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
TRIM38O00635 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM38O00635 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM38O00635 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM38O00635 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM38O00635 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM38O00635 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TRIM38O00635 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM38O00635 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TRIM38O00635 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM38O00635 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM38O00635 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM38O00635 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM38O00635 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM38O00635 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM38O00635 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.62■□□□□ 0.57
TRIM38O00635 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.62■□□□□ 0.57
TRIM38O00635 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.62■□□□□ 0.57
TRIM38O00635 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM38O00635 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TRIM38O00635 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM38O00635 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM38O00635 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.62■□□□□ 0.57
TRIM38O00635 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM38O00635 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TRIM38O00635 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TRIM38O00635 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TRIM38O00635 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TRIM38O00635 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.62■□□□□ 0.57
TRIM38O00635 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM38O00635 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM38O00635 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM38O00635 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM38O00635 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM38O00635 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM38O00635 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM38O00635 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.61■□□□□ 0.57
TRIM38O00635 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM38O00635 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM38O00635 AC090164.3-201ENST00000610780 2143 ntBASIC18.61■□□□□ 0.57
TRIM38O00635 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM38O00635 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM38O00635 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM38O00635 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
TRIM38O00635 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM38O00635 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.61■□□□□ 0.57
TRIM38O00635 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TRIM38O00635 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.61■□□□□ 0.57
TRIM38O00635 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM38O00635 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TRIM38O00635 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM38O00635 KRT18P48-201ENST00000434763 852 ntBASIC18.61■□□□□ 0.57
TRIM38O00635 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.61■□□□□ 0.57
TRIM38O00635 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.61■□□□□ 0.57
TRIM38O00635 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.61■□□□□ 0.57
TRIM38O00635 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM38O00635 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM38O00635 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM38O00635 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM38O00635 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM38O00635 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM38O00635 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM38O00635 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM38O00635 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
TRIM38O00635 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.61■□□□□ 0.57
TRIM38O00635 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM38O00635 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM38O00635 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TRIM38O00635 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM38O00635 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM38O00635 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM38O00635 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM38O00635 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.6■□□□□ 0.57
TRIM38O00635 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM38O00635 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM38O00635 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM38O00635 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.6■□□□□ 0.57
TRIM38O00635 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM38O00635 AP000523.1-201ENST00000398242 1049 ntBASIC18.6■□□□□ 0.57
TRIM38O00635 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms