Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RTCAO00442 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTCAO00442 MYLKP1-201ENST00000509077 1580 ntBASIC17.66■□□□□ 0.42
RTCAO00442 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTCAO00442 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTCAO00442 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RTCAO00442 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.66■□□□□ 0.42
RTCAO00442 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RTCAO00442 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RTCAO00442 KRT8P50-201ENST00000562022 1438 ntBASIC17.66■□□□□ 0.42
RTCAO00442 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RTCAO00442 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.66■□□□□ 0.42
RTCAO00442 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RTCAO00442 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.66■□□□□ 0.42
RTCAO00442 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.66■□□□□ 0.42
RTCAO00442 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.66■□□□□ 0.42
RTCAO00442 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RTCAO00442 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RTCAO00442 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTCAO00442 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RTCAO00442 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
RTCAO00442 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTCAO00442 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTCAO00442 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
RTCAO00442 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTCAO00442 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTCAO00442 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RTCAO00442 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTCAO00442 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTCAO00442 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTCAO00442 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTCAO00442 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTCAO00442 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RTCAO00442 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTCAO00442 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RTCAO00442 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTCAO00442 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTCAO00442 HMGA1P5-201ENST00000412453 271 ntBASIC17.65■□□□□ 0.42
RTCAO00442 KRT18P23-201ENST00000435622 1283 ntBASIC17.65■□□□□ 0.42
RTCAO00442 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.65■□□□□ 0.42
RTCAO00442 KRT18P41-201ENST00000518924 1277 ntBASIC17.65■□□□□ 0.42
RTCAO00442 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.65■□□□□ 0.42
RTCAO00442 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.65■□□□□ 0.42
RTCAO00442 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.65■□□□□ 0.42
RTCAO00442 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.65■□□□□ 0.42
RTCAO00442 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RTCAO00442 MYC-208ENST00000641036 567 ntBASIC17.65■□□□□ 0.42
RTCAO00442 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RTCAO00442 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTCAO00442 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTCAO00442 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RTCAO00442 AC007613.1-201ENST00000572811 2597 ntBASIC17.65■□□□□ 0.42
RTCAO00442 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTCAO00442 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.65■□□□□ 0.42
RTCAO00442 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.42
RTCAO00442 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RTCAO00442 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RTCAO00442 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
RTCAO00442 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RTCAO00442 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RTCAO00442 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
RTCAO00442 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.64■□□□□ 0.41
RTCAO00442 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTCAO00442 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTCAO00442 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.64■□□□□ 0.41
RTCAO00442 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RTCAO00442 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTCAO00442 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTCAO00442 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RTCAO00442 AC009947.2-201ENST00000444014 672 ntBASIC17.64■□□□□ 0.41
RTCAO00442 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.64■□□□□ 0.41
RTCAO00442 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.64■□□□□ 0.41
RTCAO00442 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.64■□□□□ 0.41
RTCAO00442 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.64■□□□□ 0.41
RTCAO00442 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
RTCAO00442 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTCAO00442 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTCAO00442 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTCAO00442 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.64■□□□□ 0.41
RTCAO00442 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RTCAO00442 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTCAO00442 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.64■□□□□ 0.41
RTCAO00442 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.64■□□□□ 0.41
RTCAO00442 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RTCAO00442 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RTCAO00442 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RTCAO00442 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
RTCAO00442 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTCAO00442 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTCAO00442 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTCAO00442 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.63■□□□□ 0.41
RTCAO00442 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTCAO00442 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTCAO00442 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTCAO00442 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.63■□□□□ 0.41
RTCAO00442 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTCAO00442 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTCAO00442 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.63■□□□□ 0.41
RTCAO00442 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTCAO00442 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms