Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
NACAE9PAV3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
NACAE9PAV3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NACAE9PAV3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
NACAE9PAV3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NACAE9PAV3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
NACAE9PAV3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC13.55□□□□□ -0.24
NACAE9PAV3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NACAE9PAV3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC13.55□□□□□ -0.24
NACAE9PAV3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC13.55□□□□□ -0.24
NACAE9PAV3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
NACAE9PAV3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NACAE9PAV3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
NACAE9PAV3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
NACAE9PAV3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC13.55□□□□□ -0.24
NACAE9PAV3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NACAE9PAV3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC13.55□□□□□ -0.24
NACAE9PAV3 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NACAE9PAV3 MIR6786-201ENST00000616843 113 ntBASIC13.55□□□□□ -0.24
NACAE9PAV3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC13.55□□□□□ -0.24
NACAE9PAV3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC13.55□□□□□ -0.24
NACAE9PAV3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
NACAE9PAV3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC13.55□□□□□ -0.24
NACAE9PAV3 AC099343.3-201ENST00000605834 2503 ntBASIC13.55□□□□□ -0.24
NACAE9PAV3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NACAE9PAV3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NACAE9PAV3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NACAE9PAV3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC13.54□□□□□ -0.24
NACAE9PAV3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NACAE9PAV3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NACAE9PAV3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NACAE9PAV3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC13.54□□□□□ -0.24
NACAE9PAV3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NACAE9PAV3 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
NACAE9PAV3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NACAE9PAV3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NACAE9PAV3 FAM197Y1-201ENST00000421178 764 ntBASIC13.54□□□□□ -0.24
NACAE9PAV3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC13.54□□□□□ -0.24
NACAE9PAV3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC13.54□□□□□ -0.24
NACAE9PAV3 AC116562.2-201ENST00000507042 360 ntBASIC13.54□□□□□ -0.24
NACAE9PAV3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC13.54□□□□□ -0.24
NACAE9PAV3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
NACAE9PAV3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.54□□□□□ -0.24
NACAE9PAV3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC13.54□□□□□ -0.24
NACAE9PAV3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
NACAE9PAV3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
NACAE9PAV3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NACAE9PAV3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
NACAE9PAV3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NACAE9PAV3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NACAE9PAV3 KRT8P45-201ENST00000414328 1447 ntBASIC13.54□□□□□ -0.24
NACAE9PAV3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NACAE9PAV3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NACAE9PAV3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NACAE9PAV3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NACAE9PAV3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NACAE9PAV3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NACAE9PAV3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
NACAE9PAV3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
NACAE9PAV3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NACAE9PAV3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC13.54□□□□□ -0.24
NACAE9PAV3 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NACAE9PAV3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NACAE9PAV3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
NACAE9PAV3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NACAE9PAV3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NACAE9PAV3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
NACAE9PAV3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NACAE9PAV3 EFTUD1P1-204ENST00000560401 1798 ntBASIC13.54□□□□□ -0.24
NACAE9PAV3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NACAE9PAV3 RCN1P1-201ENST00000400413 996 ntBASIC13.54□□□□□ -0.24
NACAE9PAV3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC13.54□□□□□ -0.24
NACAE9PAV3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC13.54□□□□□ -0.24
NACAE9PAV3 DUT-205ENST00000558813 769 ntTSL 2 BASIC13.54□□□□□ -0.24
NACAE9PAV3 C2orf69P3-201ENST00000565542 1120 ntBASIC13.54□□□□□ -0.24
NACAE9PAV3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
NACAE9PAV3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC13.54□□□□□ -0.24
NACAE9PAV3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC13.54□□□□□ -0.24
NACAE9PAV3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NACAE9PAV3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
NACAE9PAV3 LETM1P2-201ENST00000597330 2178 ntBASIC13.54□□□□□ -0.24
NACAE9PAV3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
NACAE9PAV3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NACAE9PAV3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
NACAE9PAV3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
NACAE9PAV3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NACAE9PAV3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC13.53□□□□□ -0.24
NACAE9PAV3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NACAE9PAV3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NACAE9PAV3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC13.53□□□□□ -0.24
NACAE9PAV3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
NACAE9PAV3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NACAE9PAV3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC13.53□□□□□ -0.24
NACAE9PAV3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NACAE9PAV3 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NACAE9PAV3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NACAE9PAV3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NACAE9PAV3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NACAE9PAV3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
NACAE9PAV3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms