Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
RCCD1A6NED2 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RCCD1A6NED2 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RCCD1A6NED2 PP12613-201ENST00000424958 2230 ntBASIC19.71■□□□□ 0.75
RCCD1A6NED2 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.71■□□□□ 0.75
RCCD1A6NED2 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.7■□□□□ 0.74
RCCD1A6NED2 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.7■□□□□ 0.74
RCCD1A6NED2 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RCCD1A6NED2 PHGDH-209ENST00000641074 1780 ntBASIC19.7■□□□□ 0.74
RCCD1A6NED2 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RCCD1A6NED2 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RCCD1A6NED2 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RCCD1A6NED2 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.7■□□□□ 0.74
RCCD1A6NED2 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.7■□□□□ 0.74
RCCD1A6NED2 ESRRAP1-201ENST00000400596 1257 ntBASIC19.7■□□□□ 0.74
RCCD1A6NED2 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.7■□□□□ 0.74
RCCD1A6NED2 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RCCD1A6NED2 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.7■□□□□ 0.74
RCCD1A6NED2 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.7■□□□□ 0.74
RCCD1A6NED2 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.7■□□□□ 0.74
RCCD1A6NED2 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
RCCD1A6NED2 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.7■□□□□ 0.74
RCCD1A6NED2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RCCD1A6NED2 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RCCD1A6NED2 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RCCD1A6NED2 FLJ13224-201ENST00000313737 1514 ntBASIC19.7■□□□□ 0.74
RCCD1A6NED2 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RCCD1A6NED2 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RCCD1A6NED2 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RCCD1A6NED2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RCCD1A6NED2 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RCCD1A6NED2 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RCCD1A6NED2 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.69■□□□□ 0.74
RCCD1A6NED2 AC012317.2-201ENST00000623305 2251 ntBASIC19.69■□□□□ 0.74
RCCD1A6NED2 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.69■□□□□ 0.74
RCCD1A6NED2 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RCCD1A6NED2 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.69■□□□□ 0.74
RCCD1A6NED2 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.69■□□□□ 0.74
RCCD1A6NED2 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RCCD1A6NED2 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RCCD1A6NED2 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RCCD1A6NED2 AP002982.1-201ENST00000492365 877 ntBASIC19.69■□□□□ 0.74
RCCD1A6NED2 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.69■□□□□ 0.74
RCCD1A6NED2 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RCCD1A6NED2 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RCCD1A6NED2 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RCCD1A6NED2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RCCD1A6NED2 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.69■□□□□ 0.74
RCCD1A6NED2 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
RCCD1A6NED2 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RCCD1A6NED2 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RCCD1A6NED2 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.69■□□□□ 0.74
RCCD1A6NED2 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RCCD1A6NED2 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.69■□□□□ 0.74
RCCD1A6NED2 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RCCD1A6NED2 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RCCD1A6NED2 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RCCD1A6NED2 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RCCD1A6NED2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.68■□□□□ 0.74
RCCD1A6NED2 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RCCD1A6NED2 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RCCD1A6NED2 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.68■□□□□ 0.74
RCCD1A6NED2 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.68■□□□□ 0.74
RCCD1A6NED2 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.68■□□□□ 0.74
RCCD1A6NED2 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RCCD1A6NED2 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RCCD1A6NED2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RCCD1A6NED2 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RCCD1A6NED2 MESTP1-201ENST00000404287 994 ntBASIC19.68■□□□□ 0.74
RCCD1A6NED2 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.68■□□□□ 0.74
RCCD1A6NED2 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.68■□□□□ 0.74
RCCD1A6NED2 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.68■□□□□ 0.74
RCCD1A6NED2 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.68■□□□□ 0.74
RCCD1A6NED2 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.68■□□□□ 0.74
RCCD1A6NED2 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RCCD1A6NED2 AC073648.6-201ENST00000641589 218 ntBASIC19.68■□□□□ 0.74
RCCD1A6NED2 AC080080.1-201ENST00000625121 2420 ntBASIC19.68■□□□□ 0.74
RCCD1A6NED2 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RCCD1A6NED2 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RCCD1A6NED2 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RCCD1A6NED2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RCCD1A6NED2 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RCCD1A6NED2 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RCCD1A6NED2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RCCD1A6NED2 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RCCD1A6NED2 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RCCD1A6NED2 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.68■□□□□ 0.74
RCCD1A6NED2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RCCD1A6NED2 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.67■□□□□ 0.74
RCCD1A6NED2 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RCCD1A6NED2 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.67■□□□□ 0.74
RCCD1A6NED2 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RCCD1A6NED2 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RCCD1A6NED2 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.67■□□□□ 0.74
RCCD1A6NED2 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.67■□□□□ 0.74
RCCD1A6NED2 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RCCD1A6NED2 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RCCD1A6NED2 MIR564-202ENST00000385049 94 ntBASIC19.67■□□□□ 0.74
RCCD1A6NED2 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RCCD1A6NED2 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms