Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCDC189A1A4V9 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CCDC189A1A4V9 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CCDC189A1A4V9 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC189A1A4V9 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC189A1A4V9 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC189A1A4V9 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC189A1A4V9 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC189A1A4V9 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC189A1A4V9 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC189A1A4V9 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC189A1A4V9 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC189A1A4V9 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC189A1A4V9 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC189A1A4V9 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC189A1A4V9 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CCDC189A1A4V9 AP002982.1-201ENST00000492365 877 ntBASIC18.54■□□□□ 0.56
CCDC189A1A4V9 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC189A1A4V9 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC189A1A4V9 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.54■□□□□ 0.56
CCDC189A1A4V9 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC189A1A4V9 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CCDC189A1A4V9 MYC-208ENST00000641036 567 ntBASIC18.54■□□□□ 0.56
CCDC189A1A4V9 AC073648.6-201ENST00000641589 218 ntBASIC18.54■□□□□ 0.56
CCDC189A1A4V9 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC189A1A4V9 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC189A1A4V9 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC189A1A4V9 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CCDC189A1A4V9 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC189A1A4V9 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC189A1A4V9 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC189A1A4V9 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC189A1A4V9 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC189A1A4V9 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC189A1A4V9 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC189A1A4V9 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC189A1A4V9 AC073592.3-201ENST00000625118 1834 ntBASIC18.53■□□□□ 0.56
CCDC189A1A4V9 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC189A1A4V9 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC189A1A4V9 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC189A1A4V9 KRT8P32-201ENST00000512863 1461 ntBASIC18.53■□□□□ 0.56
CCDC189A1A4V9 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC189A1A4V9 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.53■□□□□ 0.56
CCDC189A1A4V9 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC189A1A4V9 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CCDC189A1A4V9 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC189A1A4V9 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC189A1A4V9 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC189A1A4V9 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC189A1A4V9 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CCDC189A1A4V9 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC189A1A4V9 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC189A1A4V9 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CCDC189A1A4V9 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CCDC189A1A4V9 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
CCDC189A1A4V9 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC189A1A4V9 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CCDC189A1A4V9 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC189A1A4V9 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC189A1A4V9 AC068587.9-201ENST00000641814 219 ntBASIC18.53■□□□□ 0.56
CCDC189A1A4V9 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC189A1A4V9 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
CCDC189A1A4V9 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC189A1A4V9 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC189A1A4V9 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
CCDC189A1A4V9 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CCDC189A1A4V9 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC189A1A4V9 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC189A1A4V9 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
CCDC189A1A4V9 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC189A1A4V9 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC189A1A4V9 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC189A1A4V9 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC189A1A4V9 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC189A1A4V9 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC189A1A4V9 AC068418.2-201ENST00000577309 3703 ntBASIC18.52■□□□□ 0.56
CCDC189A1A4V9 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC189A1A4V9 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC189A1A4V9 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC189A1A4V9 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC189A1A4V9 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC189A1A4V9 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.52■□□□□ 0.56
CCDC189A1A4V9 RARRES2P10-201ENST00000564312 460 ntBASIC18.52■□□□□ 0.56
CCDC189A1A4V9 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC189A1A4V9 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC189A1A4V9 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC189A1A4V9 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC189A1A4V9 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC189A1A4V9 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CCDC189A1A4V9 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
CCDC189A1A4V9 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
CCDC189A1A4V9 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC189A1A4V9 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC189A1A4V9 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC189A1A4V9 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC189A1A4V9 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
CCDC189A1A4V9 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC189A1A4V9 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC189A1A4V9 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CCDC189A1A4V9 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms