Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.6■□□□□ 0.25
TRGV5A0A0B4J1U4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRGV5A0A0B4J1U4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRGV5A0A0B4J1U4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
TRGV5A0A0B4J1U4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRGV5A0A0B4J1U4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.6■□□□□ 0.25
TRGV5A0A0B4J1U4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.6■□□□□ 0.25
TRGV5A0A0B4J1U4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.6■□□□□ 0.25
TRGV5A0A0B4J1U4 AC005332.3-201ENST00000589904 676 ntBASIC16.6■□□□□ 0.25
TRGV5A0A0B4J1U4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.6■□□□□ 0.25
TRGV5A0A0B4J1U4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.6■□□□□ 0.25
TRGV5A0A0B4J1U4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRGV5A0A0B4J1U4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRGV5A0A0B4J1U4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TRGV5A0A0B4J1U4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TRGV5A0A0B4J1U4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRGV5A0A0B4J1U4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRGV5A0A0B4J1U4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRGV5A0A0B4J1U4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRGV5A0A0B4J1U4 HCG11-201ENST00000411553 5696 ntBASIC16.6■□□□□ 0.25
TRGV5A0A0B4J1U4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRGV5A0A0B4J1U4 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRGV5A0A0B4J1U4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV5A0A0B4J1U4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV5A0A0B4J1U4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV5A0A0B4J1U4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV5A0A0B4J1U4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.59■□□□□ 0.25
TRGV5A0A0B4J1U4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TRGV5A0A0B4J1U4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV5A0A0B4J1U4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV5A0A0B4J1U4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV5A0A0B4J1U4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV5A0A0B4J1U4 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV5A0A0B4J1U4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV5A0A0B4J1U4 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.59■□□□□ 0.25
TRGV5A0A0B4J1U4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV5A0A0B4J1U4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV5A0A0B4J1U4 AP002383.4-201ENST00000442518 975 ntBASIC16.59■□□□□ 0.25
TRGV5A0A0B4J1U4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.59■□□□□ 0.25
TRGV5A0A0B4J1U4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.59■□□□□ 0.25
TRGV5A0A0B4J1U4 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.59■□□□□ 0.25
TRGV5A0A0B4J1U4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
TRGV5A0A0B4J1U4 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.59■□□□□ 0.25
TRGV5A0A0B4J1U4 AP002414.4-201ENST00000589764 1148 ntBASIC16.59■□□□□ 0.25
TRGV5A0A0B4J1U4 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV5A0A0B4J1U4 KRT18P1-202ENST00000452408 1331 ntBASIC16.59■□□□□ 0.25
TRGV5A0A0B4J1U4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV5A0A0B4J1U4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV5A0A0B4J1U4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV5A0A0B4J1U4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV5A0A0B4J1U4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
TRGV5A0A0B4J1U4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV5A0A0B4J1U4 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV5A0A0B4J1U4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV5A0A0B4J1U4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV5A0A0B4J1U4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRGV5A0A0B4J1U4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.58■□□□□ 0.25
TRGV5A0A0B4J1U4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRGV5A0A0B4J1U4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRGV5A0A0B4J1U4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRGV5A0A0B4J1U4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
TRGV5A0A0B4J1U4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRGV5A0A0B4J1U4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
TRGV5A0A0B4J1U4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRGV5A0A0B4J1U4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRGV5A0A0B4J1U4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRGV5A0A0B4J1U4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.58■□□□□ 0.24
TRGV5A0A0B4J1U4 DUSP5P1-201ENST00000441325 1139 ntBASIC16.58■□□□□ 0.24
TRGV5A0A0B4J1U4 MIR3652-201ENST00000579335 131 ntBASIC16.58■□□□□ 0.24
TRGV5A0A0B4J1U4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.58■□□□□ 0.24
TRGV5A0A0B4J1U4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.58■□□□□ 0.24
TRGV5A0A0B4J1U4 GPR32P1-201ENST00000601788 811 ntBASIC16.58■□□□□ 0.24
TRGV5A0A0B4J1U4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.58■□□□□ 0.24
TRGV5A0A0B4J1U4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRGV5A0A0B4J1U4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRGV5A0A0B4J1U4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.58■□□□□ 0.24
TRGV5A0A0B4J1U4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.58■□□□□ 0.24
TRGV5A0A0B4J1U4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.58■□□□□ 0.24
TRGV5A0A0B4J1U4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRGV5A0A0B4J1U4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TRGV5A0A0B4J1U4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRGV5A0A0B4J1U4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
TRGV5A0A0B4J1U4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TRGV5A0A0B4J1U4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TRGV5A0A0B4J1U4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRGV5A0A0B4J1U4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRGV5A0A0B4J1U4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.57■□□□□ 0.24
TRGV5A0A0B4J1U4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.57■□□□□ 0.24
TRGV5A0A0B4J1U4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.57■□□□□ 0.24
TRGV5A0A0B4J1U4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRGV5A0A0B4J1U4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRGV5A0A0B4J1U4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TRGV5A0A0B4J1U4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRGV5A0A0B4J1U4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRGV5A0A0B4J1U4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRGV5A0A0B4J1U4 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRGV5A0A0B4J1U4 AC112777.1-201ENST00000540175 1423 ntBASIC16.57■□□□□ 0.24
TRGV5A0A0B4J1U4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRGV5A0A0B4J1U4 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRGV5A0A0B4J1U4 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms