Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX49Q9Y6V7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
DDX49Q9Y6V7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
DDX49Q9Y6V7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX49Q9Y6V7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX49Q9Y6V7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
DDX49Q9Y6V7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC22.26■■□□□ 1.15
DDX49Q9Y6V7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX49Q9Y6V7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
DDX49Q9Y6V7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX49Q9Y6V7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC22.26■■□□□ 1.15
DDX49Q9Y6V7 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC22.26■■□□□ 1.15
DDX49Q9Y6V7 AC010203.1-204ENST00000548782 407 ntBASIC22.26■■□□□ 1.15
DDX49Q9Y6V7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC22.26■■□□□ 1.15
DDX49Q9Y6V7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC22.26■■□□□ 1.15
DDX49Q9Y6V7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX49Q9Y6V7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
DDX49Q9Y6V7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
DDX49Q9Y6V7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX49Q9Y6V7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX49Q9Y6V7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC22.26■■□□□ 1.15
DDX49Q9Y6V7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
DDX49Q9Y6V7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
DDX49Q9Y6V7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX49Q9Y6V7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC22.26■■□□□ 1.15
DDX49Q9Y6V7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX49Q9Y6V7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX49Q9Y6V7 AC067852.2-201ENST00000590513 2313 ntBASIC22.25■■□□□ 1.15
DDX49Q9Y6V7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX49Q9Y6V7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC22.25■■□□□ 1.15
DDX49Q9Y6V7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
DDX49Q9Y6V7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC22.25■■□□□ 1.15
DDX49Q9Y6V7 AC073508.3-201ENST00000619697 1419 ntBASIC22.25■■□□□ 1.15
DDX49Q9Y6V7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
DDX49Q9Y6V7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX49Q9Y6V7 IRX1P1-201ENST00000438849 1838 ntBASIC22.25■■□□□ 1.15
DDX49Q9Y6V7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX49Q9Y6V7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX49Q9Y6V7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX49Q9Y6V7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX49Q9Y6V7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX49Q9Y6V7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC22.25■■□□□ 1.15
DDX49Q9Y6V7 AC113347.1-201ENST00000413321 391 ntBASIC22.25■■□□□ 1.15
DDX49Q9Y6V7 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC22.25■■□□□ 1.15
DDX49Q9Y6V7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
DDX49Q9Y6V7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC22.25■■□□□ 1.15
DDX49Q9Y6V7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
DDX49Q9Y6V7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC22.25■■□□□ 1.15
DDX49Q9Y6V7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX49Q9Y6V7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC22.25■■□□□ 1.15
DDX49Q9Y6V7 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
DDX49Q9Y6V7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
DDX49Q9Y6V7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC22.25■■□□□ 1.15
DDX49Q9Y6V7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC22.25■■□□□ 1.15
DDX49Q9Y6V7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX49Q9Y6V7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC22.25■■□□□ 1.15
DDX49Q9Y6V7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC22.25■■□□□ 1.15
DDX49Q9Y6V7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX49Q9Y6V7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC22.25■■□□□ 1.15
DDX49Q9Y6V7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX49Q9Y6V7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
DDX49Q9Y6V7 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC22.25■■□□□ 1.15
DDX49Q9Y6V7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC22.24■■□□□ 1.15
DDX49Q9Y6V7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
DDX49Q9Y6V7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
DDX49Q9Y6V7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC22.24■■□□□ 1.15
DDX49Q9Y6V7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
DDX49Q9Y6V7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
DDX49Q9Y6V7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
DDX49Q9Y6V7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
DDX49Q9Y6V7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
DDX49Q9Y6V7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC22.24■■□□□ 1.15
DDX49Q9Y6V7 ECEL1P2-202ENST00000465689 757 ntBASIC22.24■■□□□ 1.15
DDX49Q9Y6V7 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC22.24■■□□□ 1.15
DDX49Q9Y6V7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
DDX49Q9Y6V7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC22.24■■□□□ 1.15
DDX49Q9Y6V7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
DDX49Q9Y6V7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC22.24■■□□□ 1.15
DDX49Q9Y6V7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
DDX49Q9Y6V7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
DDX49Q9Y6V7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
DDX49Q9Y6V7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX49Q9Y6V7 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
DDX49Q9Y6V7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX49Q9Y6V7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC22.23■■□□□ 1.15
DDX49Q9Y6V7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
DDX49Q9Y6V7 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC22.23■■□□□ 1.15
DDX49Q9Y6V7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC22.23■■□□□ 1.15
DDX49Q9Y6V7 CRYGFP-201ENST00000418459 633 ntBASIC22.23■■□□□ 1.15
DDX49Q9Y6V7 SLC25A3P1-201ENST00000443844 931 ntBASIC22.23■■□□□ 1.15
DDX49Q9Y6V7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC22.23■■□□□ 1.15
DDX49Q9Y6V7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX49Q9Y6V7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC22.23■■□□□ 1.15
DDX49Q9Y6V7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC22.23■■□□□ 1.15
DDX49Q9Y6V7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
DDX49Q9Y6V7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX49Q9Y6V7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC22.23■■□□□ 1.15
DDX49Q9Y6V7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX49Q9Y6V7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
DDX49Q9Y6V7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms