Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC22.01■■□□□ 1.11
CYP46A1Q9Y6A2 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CYP46A1Q9Y6A2 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CYP46A1Q9Y6A2 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC22.01■■□□□ 1.11
CYP46A1Q9Y6A2 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC22.01■■□□□ 1.11
CYP46A1Q9Y6A2 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CYP46A1Q9Y6A2 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CYP46A1Q9Y6A2 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC22.01■■□□□ 1.11
CYP46A1Q9Y6A2 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CYP46A1Q9Y6A2 AP000593.1-201ENST00000393668 712 ntBASIC22.01■■□□□ 1.11
CYP46A1Q9Y6A2 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CYP46A1Q9Y6A2 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
CYP46A1Q9Y6A2 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CYP46A1Q9Y6A2 MIR3180-5-201ENST00000583743 153 ntBASIC22.01■■□□□ 1.11
CYP46A1Q9Y6A2 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CYP46A1Q9Y6A2 AP006294.2-201ENST00000641667 209 ntBASIC22.01■■□□□ 1.11
CYP46A1Q9Y6A2 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CYP46A1Q9Y6A2 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC22.01■■□□□ 1.11
CYP46A1Q9Y6A2 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CYP46A1Q9Y6A2 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC22.01■■□□□ 1.11
CYP46A1Q9Y6A2 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC22.01■■□□□ 1.11
CYP46A1Q9Y6A2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CYP46A1Q9Y6A2 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC22.01■■□□□ 1.11
CYP46A1Q9Y6A2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
CYP46A1Q9Y6A2 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
CYP46A1Q9Y6A2 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CYP46A1Q9Y6A2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
CYP46A1Q9Y6A2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CYP46A1Q9Y6A2 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CYP46A1Q9Y6A2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CYP46A1Q9Y6A2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CYP46A1Q9Y6A2 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
CYP46A1Q9Y6A2 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CYP46A1Q9Y6A2 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CYP46A1Q9Y6A2 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
CYP46A1Q9Y6A2 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
CYP46A1Q9Y6A2 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC22■■□□□ 1.11
CYP46A1Q9Y6A2 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
CYP46A1Q9Y6A2 AP000525.1-201ENST00000608286 694 ntBASIC22■■□□□ 1.11
CYP46A1Q9Y6A2 AL023803.3-201ENST00000615559 522 ntBASIC22■■□□□ 1.11
CYP46A1Q9Y6A2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC22■■□□□ 1.11
CYP46A1Q9Y6A2 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
CYP46A1Q9Y6A2 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CYP46A1Q9Y6A2 NOC2LP1-202ENST00000452600 2235 ntBASIC22■■□□□ 1.11
CYP46A1Q9Y6A2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CYP46A1Q9Y6A2 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC22■■□□□ 1.11
CYP46A1Q9Y6A2 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
CYP46A1Q9Y6A2 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC22■■□□□ 1.11
CYP46A1Q9Y6A2 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CYP46A1Q9Y6A2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CYP46A1Q9Y6A2 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CYP46A1Q9Y6A2 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CYP46A1Q9Y6A2 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.99■■□□□ 1.11
CYP46A1Q9Y6A2 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.99■■□□□ 1.11
CYP46A1Q9Y6A2 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CYP46A1Q9Y6A2 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
CYP46A1Q9Y6A2 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
CYP46A1Q9Y6A2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CYP46A1Q9Y6A2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CYP46A1Q9Y6A2 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC21.99■■□□□ 1.11
CYP46A1Q9Y6A2 AC135776.1-201ENST00000319817 2481 ntBASIC21.99■■□□□ 1.11
CYP46A1Q9Y6A2 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
CYP46A1Q9Y6A2 AC018470.1-201ENST00000624790 3129 ntBASIC21.99■■□□□ 1.11
CYP46A1Q9Y6A2 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
CYP46A1Q9Y6A2 SLC25A1P2-201ENST00000430693 912 ntBASIC21.99■■□□□ 1.11
CYP46A1Q9Y6A2 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.99■■□□□ 1.11
CYP46A1Q9Y6A2 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CYP46A1Q9Y6A2 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CYP46A1Q9Y6A2 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CYP46A1Q9Y6A2 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CYP46A1Q9Y6A2 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
CYP46A1Q9Y6A2 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CYP46A1Q9Y6A2 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CYP46A1Q9Y6A2 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CYP46A1Q9Y6A2 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC21.98■■□□□ 1.11
CYP46A1Q9Y6A2 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CYP46A1Q9Y6A2 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CYP46A1Q9Y6A2 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CYP46A1Q9Y6A2 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
CYP46A1Q9Y6A2 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CYP46A1Q9Y6A2 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CYP46A1Q9Y6A2 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.98■■□□□ 1.11
CYP46A1Q9Y6A2 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
CYP46A1Q9Y6A2 FITM1-202ENST00000559294 800 ntBASIC21.98■■□□□ 1.11
CYP46A1Q9Y6A2 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
CYP46A1Q9Y6A2 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
CYP46A1Q9Y6A2 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CYP46A1Q9Y6A2 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CYP46A1Q9Y6A2 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CYP46A1Q9Y6A2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
CYP46A1Q9Y6A2 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
CYP46A1Q9Y6A2 KRT8P50-201ENST00000562022 1438 ntBASIC21.97■■□□□ 1.11
CYP46A1Q9Y6A2 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CYP46A1Q9Y6A2 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CYP46A1Q9Y6A2 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
CYP46A1Q9Y6A2 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC21.97■■□□□ 1.11
CYP46A1Q9Y6A2 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CYP46A1Q9Y6A2 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CYP46A1Q9Y6A2 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CYP46A1Q9Y6A2 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms