Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHA3Q9Y5H8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PCDHA3Q9Y5H8 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHA3Q9Y5H8 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHA3Q9Y5H8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHA3Q9Y5H8 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHA3Q9Y5H8 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDHA3Q9Y5H8 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PCDHA3Q9Y5H8 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PCDHA3Q9Y5H8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDHA3Q9Y5H8 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PCDHA3Q9Y5H8 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDHA3Q9Y5H8 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHA3Q9Y5H8 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
PCDHA3Q9Y5H8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
PCDHA3Q9Y5H8 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
PCDHA3Q9Y5H8 DGCR10-201ENST00000609839 495 ntBASIC19.38■□□□□ 0.69
PCDHA3Q9Y5H8 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.38■□□□□ 0.69
PCDHA3Q9Y5H8 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDHA3Q9Y5H8 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
PCDHA3Q9Y5H8 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 SLC25A6P5-201ENST00000435663 894 ntBASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 MCCD1P1-208ENST00000445732 328 ntBASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 ITM2C-210ENST00000620962 501 ntBASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHA3Q9Y5H8 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHA3Q9Y5H8 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHA3Q9Y5H8 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHA3Q9Y5H8 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHA3Q9Y5H8 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHA3Q9Y5H8 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHA3Q9Y5H8 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PCDHA3Q9Y5H8 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
PCDHA3Q9Y5H8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHA3Q9Y5H8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.36■□□□□ 0.69
PCDHA3Q9Y5H8 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHA3Q9Y5H8 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHA3Q9Y5H8 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHA3Q9Y5H8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PCDHA3Q9Y5H8 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHA3Q9Y5H8 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHA3Q9Y5H8 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHA3Q9Y5H8 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHA3Q9Y5H8 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHA3Q9Y5H8 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.36■□□□□ 0.69
PCDHA3Q9Y5H8 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
PCDHA3Q9Y5H8 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHA3Q9Y5H8 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHA3Q9Y5H8 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHA3Q9Y5H8 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHA3Q9Y5H8 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHA3Q9Y5H8 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHA3Q9Y5H8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDHA3Q9Y5H8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHA3Q9Y5H8 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms