Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHGA3Q9Y5H0 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHGA3Q9Y5H0 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.02■□□□□ 0.47
PCDHGA3Q9Y5H0 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHGA3Q9Y5H0 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHGA3Q9Y5H0 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.02■□□□□ 0.47
PCDHGA3Q9Y5H0 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHGA3Q9Y5H0 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHGA3Q9Y5H0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDHGA3Q9Y5H0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
PCDHGA3Q9Y5H0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA3Q9Y5H0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PCDHGA3Q9Y5H0 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA3Q9Y5H0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA3Q9Y5H0 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.01■□□□□ 0.47
PCDHGA3Q9Y5H0 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
PCDHGA3Q9Y5H0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PCDHGA3Q9Y5H0 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
PCDHGA3Q9Y5H0 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA3Q9Y5H0 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA3Q9Y5H0 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHGA3Q9Y5H0 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA3Q9Y5H0 AL450487.1-201ENST00000426799 995 ntBASIC18.01■□□□□ 0.47
PCDHGA3Q9Y5H0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDHGA3Q9Y5H0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDHGA3Q9Y5H0 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA3Q9Y5H0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.01■□□□□ 0.47
PCDHGA3Q9Y5H0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDHGA3Q9Y5H0 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.01■□□□□ 0.47
PCDHGA3Q9Y5H0 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA3Q9Y5H0 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
PCDHGA3Q9Y5H0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA3Q9Y5H0 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA3Q9Y5H0 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA3Q9Y5H0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHGA3Q9Y5H0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA3Q9Y5H0 ZNF815P-204ENST00000434898 1737 ntBASIC18.01■□□□□ 0.47
PCDHGA3Q9Y5H0 HCG11-201ENST00000411553 5696 ntBASIC18.01■□□□□ 0.47
PCDHGA3Q9Y5H0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA3Q9Y5H0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18■□□□□ 0.47
PCDHGA3Q9Y5H0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA3Q9Y5H0 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA3Q9Y5H0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA3Q9Y5H0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA3Q9Y5H0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18■□□□□ 0.47
PCDHGA3Q9Y5H0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18■□□□□ 0.47
PCDHGA3Q9Y5H0 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA3Q9Y5H0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA3Q9Y5H0 ATP5G2P1-201ENST00000433580 426 ntBASIC18■□□□□ 0.47
PCDHGA3Q9Y5H0 TSPY23P-201ENST00000440136 739 ntBASIC18■□□□□ 0.47
PCDHGA3Q9Y5H0 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18■□□□□ 0.47
PCDHGA3Q9Y5H0 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18■□□□□ 0.47
PCDHGA3Q9Y5H0 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA3Q9Y5H0 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18■□□□□ 0.47
PCDHGA3Q9Y5H0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18■□□□□ 0.47
PCDHGA3Q9Y5H0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA3Q9Y5H0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA3Q9Y5H0 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA3Q9Y5H0 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18■□□□□ 0.47
PCDHGA3Q9Y5H0 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18■□□□□ 0.47
PCDHGA3Q9Y5H0 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA3Q9Y5H0 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA3Q9Y5H0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18■□□□□ 0.47
PCDHGA3Q9Y5H0 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA3Q9Y5H0 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA3Q9Y5H0 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18■□□□□ 0.47
PCDHGA3Q9Y5H0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA3Q9Y5H0 AL138781.2-201ENST00000617896 1843 ntBASIC18■□□□□ 0.47
PCDHGA3Q9Y5H0 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA3Q9Y5H0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHGA3Q9Y5H0 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHGA3Q9Y5H0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHGA3Q9Y5H0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHGA3Q9Y5H0 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA3Q9Y5H0 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA3Q9Y5H0 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA3Q9Y5H0 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA3Q9Y5H0 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA3Q9Y5H0 AC034232.1-201ENST00000506026 1064 ntBASIC17.99■□□□□ 0.47
PCDHGA3Q9Y5H0 CLEC4GP1-201ENST00000596555 870 ntBASIC17.99■□□□□ 0.47
PCDHGA3Q9Y5H0 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHGA3Q9Y5H0 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHGA3Q9Y5H0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.99■□□□□ 0.47
PCDHGA3Q9Y5H0 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHGA3Q9Y5H0 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PCDHGA3Q9Y5H0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA3Q9Y5H0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHGA3Q9Y5H0 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA3Q9Y5H0 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA3Q9Y5H0 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHGA3Q9Y5H0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA3Q9Y5H0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA3Q9Y5H0 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA3Q9Y5H0 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA3Q9Y5H0 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA3Q9Y5H0 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA3Q9Y5H0 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PCDHGA3Q9Y5H0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDHGA3Q9Y5H0 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
PCDHGA3Q9Y5H0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms