Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA6Q9Y5G7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHGA6Q9Y5G7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA6Q9Y5G7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA6Q9Y5G7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA6Q9Y5G7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA6Q9Y5G7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA6Q9Y5G7 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PCDHGA6Q9Y5G7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.86■□□□□ 0.45
PCDHGA6Q9Y5G7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA6Q9Y5G7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHGA6Q9Y5G7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
PCDHGA6Q9Y5G7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA6Q9Y5G7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.86■□□□□ 0.45
PCDHGA6Q9Y5G7 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA6Q9Y5G7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHGA6Q9Y5G7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA6Q9Y5G7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHGA6Q9Y5G7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA6Q9Y5G7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA6Q9Y5G7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
PCDHGA6Q9Y5G7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHGA6Q9Y5G7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PCDHGA6Q9Y5G7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA6Q9Y5G7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA6Q9Y5G7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA6Q9Y5G7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
PCDHGA6Q9Y5G7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA6Q9Y5G7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA6Q9Y5G7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA6Q9Y5G7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA6Q9Y5G7 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
PCDHGA6Q9Y5G7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA6Q9Y5G7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA6Q9Y5G7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA6Q9Y5G7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA6Q9Y5G7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.85■□□□□ 0.45
PCDHGA6Q9Y5G7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA6Q9Y5G7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHGA6Q9Y5G7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
PCDHGA6Q9Y5G7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.85■□□□□ 0.45
PCDHGA6Q9Y5G7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA6Q9Y5G7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHGA6Q9Y5G7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
PCDHGA6Q9Y5G7 AC104417.2-201ENST00000562989 1793 ntBASIC17.85■□□□□ 0.45
PCDHGA6Q9Y5G7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
PCDHGA6Q9Y5G7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHGA6Q9Y5G7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA6Q9Y5G7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA6Q9Y5G7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
PCDHGA6Q9Y5G7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA6Q9Y5G7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA6Q9Y5G7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA6Q9Y5G7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA6Q9Y5G7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHGA6Q9Y5G7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA6Q9Y5G7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA6Q9Y5G7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PCDHGA6Q9Y5G7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA6Q9Y5G7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA6Q9Y5G7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PCDHGA6Q9Y5G7 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA6Q9Y5G7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGA6Q9Y5G7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGA6Q9Y5G7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA6Q9Y5G7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA6Q9Y5G7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA6Q9Y5G7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA6Q9Y5G7 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA6Q9Y5G7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PCDHGA6Q9Y5G7 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDHGA6Q9Y5G7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGA6Q9Y5G7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.84■□□□□ 0.45
PCDHGA6Q9Y5G7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PCDHGA6Q9Y5G7 AC112907.2-201ENST00000448639 330 ntBASIC17.84■□□□□ 0.45
PCDHGA6Q9Y5G7 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.84■□□□□ 0.45
PCDHGA6Q9Y5G7 GCSHP2-201ENST00000560971 527 ntBASIC17.84■□□□□ 0.45
PCDHGA6Q9Y5G7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.84■□□□□ 0.45
PCDHGA6Q9Y5G7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA6Q9Y5G7 AL390961.4-201ENST00000623958 2535 ntBASIC17.84■□□□□ 0.45
PCDHGA6Q9Y5G7 AC135050.7-201ENST00000624508 2218 ntBASIC17.84■□□□□ 0.45
PCDHGA6Q9Y5G7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
PCDHGA6Q9Y5G7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGA6Q9Y5G7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA6Q9Y5G7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
PCDHGA6Q9Y5G7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
PCDHGA6Q9Y5G7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PCDHGA6Q9Y5G7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA6Q9Y5G7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGA6Q9Y5G7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGA6Q9Y5G7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.83■□□□□ 0.45
PCDHGA6Q9Y5G7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.83■□□□□ 0.45
PCDHGA6Q9Y5G7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
PCDHGA6Q9Y5G7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGA6Q9Y5G7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.83■□□□□ 0.45
PCDHGA6Q9Y5G7 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA6Q9Y5G7 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA6Q9Y5G7 TSPY21P-201ENST00000433481 731 ntBASIC17.83■□□□□ 0.44
PCDHGA6Q9Y5G7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.83■□□□□ 0.44
PCDHGA6Q9Y5G7 VENTXP5-201ENST00000523979 775 ntBASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms