Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHB3Q9Y5E6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHB3Q9Y5E6 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHB3Q9Y5E6 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
PCDHB3Q9Y5E6 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PCDHB3Q9Y5E6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB3Q9Y5E6 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB3Q9Y5E6 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
PCDHB3Q9Y5E6 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHB3Q9Y5E6 AC020763.4-201ENST00000623414 4170 ntBASIC18.16■□□□□ 0.5
PCDHB3Q9Y5E6 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB3Q9Y5E6 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB3Q9Y5E6 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
PCDHB3Q9Y5E6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB3Q9Y5E6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.16■□□□□ 0.5
PCDHB3Q9Y5E6 AC117947.1-201ENST00000427448 529 ntBASIC18.16■□□□□ 0.5
PCDHB3Q9Y5E6 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.16■□□□□ 0.5
PCDHB3Q9Y5E6 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHB3Q9Y5E6 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB3Q9Y5E6 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.16■□□□□ 0.5
PCDHB3Q9Y5E6 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB3Q9Y5E6 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHB3Q9Y5E6 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.16■□□□□ 0.5
PCDHB3Q9Y5E6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB3Q9Y5E6 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHB3Q9Y5E6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHB3Q9Y5E6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHB3Q9Y5E6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PCDHB3Q9Y5E6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHB3Q9Y5E6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB3Q9Y5E6 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHB3Q9Y5E6 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PCDHB3Q9Y5E6 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.15■□□□□ 0.5
PCDHB3Q9Y5E6 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB3Q9Y5E6 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
PCDHB3Q9Y5E6 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB3Q9Y5E6 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHB3Q9Y5E6 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB3Q9Y5E6 SDHAP1-207ENST00000440850 2000 ntBASIC18.15■□□□□ 0.5
PCDHB3Q9Y5E6 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB3Q9Y5E6 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHB3Q9Y5E6 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHB3Q9Y5E6 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB3Q9Y5E6 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB3Q9Y5E6 COX11P1-201ENST00000489116 835 ntBASIC18.15■□□□□ 0.5
PCDHB3Q9Y5E6 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PCDHB3Q9Y5E6 AC139887.4-201ENST00000607877 719 ntBASIC18.15■□□□□ 0.5
PCDHB3Q9Y5E6 AL031432.5-201ENST00000641059 760 ntBASIC18.15■□□□□ 0.5
PCDHB3Q9Y5E6 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB3Q9Y5E6 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
PCDHB3Q9Y5E6 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB3Q9Y5E6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHB3Q9Y5E6 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB3Q9Y5E6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB3Q9Y5E6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHB3Q9Y5E6 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHB3Q9Y5E6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
PCDHB3Q9Y5E6 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHB3Q9Y5E6 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB3Q9Y5E6 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB3Q9Y5E6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB3Q9Y5E6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB3Q9Y5E6 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB3Q9Y5E6 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB3Q9Y5E6 TSPY5P-201ENST00000426936 936 ntBASIC18.14■□□□□ 0.49
PCDHB3Q9Y5E6 UPK3BP1-201ENST00000428678 509 ntBASIC18.14■□□□□ 0.49
PCDHB3Q9Y5E6 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHB3Q9Y5E6 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
PCDHB3Q9Y5E6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB3Q9Y5E6 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB3Q9Y5E6 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB3Q9Y5E6 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB3Q9Y5E6 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB3Q9Y5E6 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB3Q9Y5E6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHB3Q9Y5E6 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHB3Q9Y5E6 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB3Q9Y5E6 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PCDHB3Q9Y5E6 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB3Q9Y5E6 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB3Q9Y5E6 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB3Q9Y5E6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHB3Q9Y5E6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB3Q9Y5E6 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PCDHB3Q9Y5E6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB3Q9Y5E6 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB3Q9Y5E6 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB3Q9Y5E6 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB3Q9Y5E6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB3Q9Y5E6 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB3Q9Y5E6 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHB3Q9Y5E6 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDHB3Q9Y5E6 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDHB3Q9Y5E6 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDHB3Q9Y5E6 FAM8A6P-201ENST00000407496 1135 ntBASIC18.13■□□□□ 0.49
PCDHB3Q9Y5E6 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHB3Q9Y5E6 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHB3Q9Y5E6 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHB3Q9Y5E6 AP003041.3-201ENST00000527151 707 ntBASIC18.13■□□□□ 0.49
PCDHB3Q9Y5E6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms