Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
AP4S1Q9Y587 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP4S1Q9Y587 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
AP4S1Q9Y587 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP4S1Q9Y587 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.54■□□□□ 0.4
AP4S1Q9Y587 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP4S1Q9Y587 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
AP4S1Q9Y587 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP4S1Q9Y587 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
AP4S1Q9Y587 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP4S1Q9Y587 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP4S1Q9Y587 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
AP4S1Q9Y587 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP4S1Q9Y587 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
AP4S1Q9Y587 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
AP4S1Q9Y587 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
AP4S1Q9Y587 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
AP4S1Q9Y587 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.53■□□□□ 0.4
AP4S1Q9Y587 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
AP4S1Q9Y587 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP4S1Q9Y587 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
AP4S1Q9Y587 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP4S1Q9Y587 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP4S1Q9Y587 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
AP4S1Q9Y587 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.53■□□□□ 0.4
AP4S1Q9Y587 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.53■□□□□ 0.4
AP4S1Q9Y587 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.53■□□□□ 0.4
AP4S1Q9Y587 AC093787.1-201ENST00000450396 207 ntBASIC17.53■□□□□ 0.4
AP4S1Q9Y587 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.53■□□□□ 0.4
AP4S1Q9Y587 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.53■□□□□ 0.4
AP4S1Q9Y587 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
AP4S1Q9Y587 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.53■□□□□ 0.4
AP4S1Q9Y587 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP4S1Q9Y587 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP4S1Q9Y587 AL121906.2-201ENST00000621597 723 ntBASIC17.53■□□□□ 0.4
AP4S1Q9Y587 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.53■□□□□ 0.4
AP4S1Q9Y587 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP4S1Q9Y587 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
AP4S1Q9Y587 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.53■□□□□ 0.4
AP4S1Q9Y587 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
AP4S1Q9Y587 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
AP4S1Q9Y587 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
AP4S1Q9Y587 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
AP4S1Q9Y587 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP4S1Q9Y587 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP4S1Q9Y587 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP4S1Q9Y587 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.53■□□□□ 0.4
AP4S1Q9Y587 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
AP4S1Q9Y587 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP4S1Q9Y587 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP4S1Q9Y587 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP4S1Q9Y587 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.52■□□□□ 0.4
AP4S1Q9Y587 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
AP4S1Q9Y587 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
AP4S1Q9Y587 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP4S1Q9Y587 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP4S1Q9Y587 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.52■□□□□ 0.4
AP4S1Q9Y587 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
AP4S1Q9Y587 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
AP4S1Q9Y587 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.52■□□□□ 0.4
AP4S1Q9Y587 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
AP4S1Q9Y587 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
AP4S1Q9Y587 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
AP4S1Q9Y587 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.52■□□□□ 0.4
AP4S1Q9Y587 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.52■□□□□ 0.4
AP4S1Q9Y587 RAP2CP1-201ENST00000605103 478 ntBASIC17.52■□□□□ 0.4
AP4S1Q9Y587 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.52■□□□□ 0.4
AP4S1Q9Y587 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.52■□□□□ 0.4
AP4S1Q9Y587 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
AP4S1Q9Y587 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.52■□□□□ 0.4
AP4S1Q9Y587 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP4S1Q9Y587 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP4S1Q9Y587 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP4S1Q9Y587 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP4S1Q9Y587 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
AP4S1Q9Y587 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
AP4S1Q9Y587 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
AP4S1Q9Y587 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.52■□□□□ 0.39
AP4S1Q9Y587 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
AP4S1Q9Y587 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
AP4S1Q9Y587 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.52■□□□□ 0.39
AP4S1Q9Y587 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
AP4S1Q9Y587 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.52■□□□□ 0.39
AP4S1Q9Y587 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
AP4S1Q9Y587 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AP4S1Q9Y587 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.51■□□□□ 0.39
AP4S1Q9Y587 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP4S1Q9Y587 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.51■□□□□ 0.39
AP4S1Q9Y587 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AP4S1Q9Y587 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.51■□□□□ 0.39
AP4S1Q9Y587 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP4S1Q9Y587 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AP4S1Q9Y587 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP4S1Q9Y587 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.51■□□□□ 0.39
AP4S1Q9Y587 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.51■□□□□ 0.39
AP4S1Q9Y587 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP4S1Q9Y587 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP4S1Q9Y587 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
AP4S1Q9Y587 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP4S1Q9Y587 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms