Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
UBE2D4Q9Y2X8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC12.93□□□□□ -0.34
UBE2D4Q9Y2X8 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBE2D4Q9Y2X8 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UBE2D4Q9Y2X8 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
UBE2D4Q9Y2X8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBE2D4Q9Y2X8 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
UBE2D4Q9Y2X8 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBE2D4Q9Y2X8 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBE2D4Q9Y2X8 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC12.93□□□□□ -0.34
UBE2D4Q9Y2X8 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBE2D4Q9Y2X8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBE2D4Q9Y2X8 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBE2D4Q9Y2X8 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC12.93□□□□□ -0.34
UBE2D4Q9Y2X8 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC12.93□□□□□ -0.34
UBE2D4Q9Y2X8 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC12.93□□□□□ -0.34
UBE2D4Q9Y2X8 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC12.93□□□□□ -0.34
UBE2D4Q9Y2X8 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UBE2D4Q9Y2X8 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
UBE2D4Q9Y2X8 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC12.93□□□□□ -0.34
UBE2D4Q9Y2X8 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC12.93□□□□□ -0.34
UBE2D4Q9Y2X8 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UBE2D4Q9Y2X8 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UBE2D4Q9Y2X8 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
UBE2D4Q9Y2X8 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
UBE2D4Q9Y2X8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UBE2D4Q9Y2X8 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBE2D4Q9Y2X8 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBE2D4Q9Y2X8 POR-209ENST00000439269 1858 ntTSL 2 BASIC12.93□□□□□ -0.34
UBE2D4Q9Y2X8 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
UBE2D4Q9Y2X8 AC008556.1-201ENST00000610908 2040 ntBASIC12.93□□□□□ -0.34
UBE2D4Q9Y2X8 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBE2D4Q9Y2X8 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
UBE2D4Q9Y2X8 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UBE2D4Q9Y2X8 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
UBE2D4Q9Y2X8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBE2D4Q9Y2X8 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 REXO1L9P-201ENST00000604264 2108 ntBASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 KRT8P11-201ENST00000409686 1436 ntBASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 POM121L13P-201ENST00000422362 380 ntBASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 Z85996.1-201ENST00000494644 937 ntBASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 UNC93B4-201ENST00000505679 747 ntBASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 DLX3-202ENST00000512495 834 ntTSL 2 BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 GNE-204ENST00000539208 2190 ntTSL 2 BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 WT1-AS_3.1-201ENST00000613262 234 ntBASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBE2D4Q9Y2X8 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 THEM4-205ENST00000489410 643 ntTSL 2 BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 PRSS44-201ENST00000515154 1146 ntBASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms