Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH9Q9ULB4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH9Q9ULB4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH9Q9ULB4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDH9Q9ULB4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDH9Q9ULB4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.57■□□□□ 0.72
CDH9Q9ULB4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH9Q9ULB4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH9Q9ULB4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDH9Q9ULB4 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.57■□□□□ 0.72
CDH9Q9ULB4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
CDH9Q9ULB4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CDH9Q9ULB4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.57■□□□□ 0.72
CDH9Q9ULB4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDH9Q9ULB4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.57■□□□□ 0.72
CDH9Q9ULB4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.57■□□□□ 0.72
CDH9Q9ULB4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.57■□□□□ 0.72
CDH9Q9ULB4 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.57■□□□□ 0.72
CDH9Q9ULB4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CDH9Q9ULB4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.57■□□□□ 0.72
CDH9Q9ULB4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CDH9Q9ULB4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDH9Q9ULB4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.57■□□□□ 0.72
CDH9Q9ULB4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDH9Q9ULB4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH9Q9ULB4 AL499627.1-201ENST00000569373 2188 ntBASIC19.57■□□□□ 0.72
CDH9Q9ULB4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH9Q9ULB4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH9Q9ULB4 AL031598.1-201ENST00000561511 1773 ntBASIC19.57■□□□□ 0.72
CDH9Q9ULB4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.57■□□□□ 0.72
CDH9Q9ULB4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH9Q9ULB4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH9Q9ULB4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDH9Q9ULB4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH9Q9ULB4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDH9Q9ULB4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDH9Q9ULB4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CDH9Q9ULB4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDH9Q9ULB4 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH9Q9ULB4 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH9Q9ULB4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH9Q9ULB4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDH9Q9ULB4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH9Q9ULB4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.56■□□□□ 0.72
CDH9Q9ULB4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.56■□□□□ 0.72
CDH9Q9ULB4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CDH9Q9ULB4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.56■□□□□ 0.72
CDH9Q9ULB4 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.56■□□□□ 0.72
CDH9Q9ULB4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CDH9Q9ULB4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH9Q9ULB4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.56■□□□□ 0.72
CDH9Q9ULB4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
CDH9Q9ULB4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDH9Q9ULB4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CDH9Q9ULB4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH9Q9ULB4 AL162741.1-201ENST00000565563 1558 ntBASIC19.56■□□□□ 0.72
CDH9Q9ULB4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH9Q9ULB4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDH9Q9ULB4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH9Q9ULB4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.55■□□□□ 0.72
CDH9Q9ULB4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH9Q9ULB4 AC009102.3-201ENST00000623118 1491 ntBASIC19.55■□□□□ 0.72
CDH9Q9ULB4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CDH9Q9ULB4 BX323043.1-201ENST00000641006 1765 ntBASIC19.55■□□□□ 0.72
CDH9Q9ULB4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.55■□□□□ 0.72
CDH9Q9ULB4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH9Q9ULB4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH9Q9ULB4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH9Q9ULB4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH9Q9ULB4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH9Q9ULB4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH9Q9ULB4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH9Q9ULB4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.55■□□□□ 0.72
CDH9Q9ULB4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDH9Q9ULB4 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH9Q9ULB4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.55■□□□□ 0.72
CDH9Q9ULB4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.55■□□□□ 0.72
CDH9Q9ULB4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.55■□□□□ 0.72
CDH9Q9ULB4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.55■□□□□ 0.72
CDH9Q9ULB4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.55■□□□□ 0.72
CDH9Q9ULB4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDH9Q9ULB4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.55■□□□□ 0.72
CDH9Q9ULB4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.55■□□□□ 0.72
CDH9Q9ULB4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH9Q9ULB4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH9Q9ULB4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.55■□□□□ 0.72
CDH9Q9ULB4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDH9Q9ULB4 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.55■□□□□ 0.72
CDH9Q9ULB4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.55■□□□□ 0.72
CDH9Q9ULB4 CROCCP3-202ENST00000420820 1947 ntBASIC19.55■□□□□ 0.72
CDH9Q9ULB4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH9Q9ULB4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH9Q9ULB4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH9Q9ULB4 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.54■□□□□ 0.72
CDH9Q9ULB4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.54■□□□□ 0.72
CDH9Q9ULB4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.54■□□□□ 0.72
CDH9Q9ULB4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDH9Q9ULB4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CDH9Q9ULB4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.54■□□□□ 0.72
CDH9Q9ULB4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms