Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.93■□□□□ 0.3
CHRNA9Q9UGM1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA9Q9UGM1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CHRNA9Q9UGM1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 AL357033.4-201ENST00000617703 1807 ntBASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 MIR4674-201ENST00000582457 87 ntBASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 AC020763.4-201ENST00000623414 4170 ntBASIC16.92■□□□□ 0.3
CHRNA9Q9UGM1 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA9Q9UGM1 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
CHRNA9Q9UGM1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA9Q9UGM1 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA9Q9UGM1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA9Q9UGM1 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA9Q9UGM1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA9Q9UGM1 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.91■□□□□ 0.3
CHRNA9Q9UGM1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.91■□□□□ 0.3
CHRNA9Q9UGM1 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.91■□□□□ 0.3
CHRNA9Q9UGM1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CHRNA9Q9UGM1 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.91■□□□□ 0.3
CHRNA9Q9UGM1 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA9Q9UGM1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.91■□□□□ 0.3
CHRNA9Q9UGM1 AC087499.1-201ENST00000418141 1075 ntBASIC16.91■□□□□ 0.3
CHRNA9Q9UGM1 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.91■□□□□ 0.3
CHRNA9Q9UGM1 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.91■□□□□ 0.3
CHRNA9Q9UGM1 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA9Q9UGM1 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.91■□□□□ 0.3
CHRNA9Q9UGM1 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.91■□□□□ 0.3
CHRNA9Q9UGM1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CHRNA9Q9UGM1 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.91■□□□□ 0.3
CHRNA9Q9UGM1 MIR3180-5-201ENST00000583743 153 ntBASIC16.91■□□□□ 0.3
CHRNA9Q9UGM1 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CHRNA9Q9UGM1 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.91■□□□□ 0.3
CHRNA9Q9UGM1 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA9Q9UGM1 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA9Q9UGM1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.91■□□□□ 0.3
CHRNA9Q9UGM1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.91■□□□□ 0.3
CHRNA9Q9UGM1 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA9Q9UGM1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA9Q9UGM1 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA9Q9UGM1 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.9■□□□□ 0.3
CHRNA9Q9UGM1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CHRNA9Q9UGM1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA9Q9UGM1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA9Q9UGM1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA9Q9UGM1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA9Q9UGM1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA9Q9UGM1 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA9Q9UGM1 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CHRNA9Q9UGM1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CHRNA9Q9UGM1 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA9Q9UGM1 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA9Q9UGM1 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA9Q9UGM1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.9■□□□□ 0.3
CHRNA9Q9UGM1 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CHRNA9Q9UGM1 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.9■□□□□ 0.3
CHRNA9Q9UGM1 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.9■□□□□ 0.3
CHRNA9Q9UGM1 AC073912.3-201ENST00000624414 853 ntBASIC16.9■□□□□ 0.3
CHRNA9Q9UGM1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA9Q9UGM1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA9Q9UGM1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CHRNA9Q9UGM1 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA9Q9UGM1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA9Q9UGM1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CHRNA9Q9UGM1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms