Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
HACD3Q9P035 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HACD3Q9P035 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.76■□□□□ 0.59
HACD3Q9P035 WWOX-216ENST00000569818 525 ntBASIC18.76■□□□□ 0.59
HACD3Q9P035 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.76■□□□□ 0.59
HACD3Q9P035 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HACD3Q9P035 AC145285.6-201ENST00000604632 637 ntBASIC18.76■□□□□ 0.59
HACD3Q9P035 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
HACD3Q9P035 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
HACD3Q9P035 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
HACD3Q9P035 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.76■□□□□ 0.59
HACD3Q9P035 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HACD3Q9P035 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HACD3Q9P035 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HACD3Q9P035 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HACD3Q9P035 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HACD3Q9P035 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HACD3Q9P035 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.76■□□□□ 0.59
HACD3Q9P035 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HACD3Q9P035 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.75■□□□□ 0.59
HACD3Q9P035 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
HACD3Q9P035 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
HACD3Q9P035 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HACD3Q9P035 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.75■□□□□ 0.59
HACD3Q9P035 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.75■□□□□ 0.59
HACD3Q9P035 HMGA1P5-201ENST00000412453 271 ntBASIC18.75■□□□□ 0.59
HACD3Q9P035 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.75■□□□□ 0.59
HACD3Q9P035 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HACD3Q9P035 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.75■□□□□ 0.59
HACD3Q9P035 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
HACD3Q9P035 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HACD3Q9P035 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.75■□□□□ 0.59
HACD3Q9P035 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
HACD3Q9P035 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HACD3Q9P035 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
HACD3Q9P035 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HACD3Q9P035 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HACD3Q9P035 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
HACD3Q9P035 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HACD3Q9P035 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.75■□□□□ 0.59
HACD3Q9P035 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
HACD3Q9P035 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.75■□□□□ 0.59
HACD3Q9P035 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
HACD3Q9P035 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HACD3Q9P035 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
HACD3Q9P035 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HACD3Q9P035 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HACD3Q9P035 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.74■□□□□ 0.59
HACD3Q9P035 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HACD3Q9P035 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HACD3Q9P035 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HACD3Q9P035 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HACD3Q9P035 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HACD3Q9P035 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HACD3Q9P035 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HACD3Q9P035 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HACD3Q9P035 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HACD3Q9P035 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HACD3Q9P035 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HACD3Q9P035 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HACD3Q9P035 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HACD3Q9P035 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HACD3Q9P035 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HACD3Q9P035 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.74■□□□□ 0.59
HACD3Q9P035 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
HACD3Q9P035 KRT18P41-201ENST00000518924 1277 ntBASIC18.74■□□□□ 0.59
HACD3Q9P035 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HACD3Q9P035 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.74■□□□□ 0.59
HACD3Q9P035 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.74■□□□□ 0.59
HACD3Q9P035 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
HACD3Q9P035 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.74■□□□□ 0.59
HACD3Q9P035 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.74■□□□□ 0.59
HACD3Q9P035 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HACD3Q9P035 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HACD3Q9P035 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
HACD3Q9P035 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HACD3Q9P035 AC112777.1-201ENST00000540175 1423 ntBASIC18.74■□□□□ 0.59
HACD3Q9P035 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HACD3Q9P035 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HACD3Q9P035 PKD1P1-201ENST00000458669 6805 ntBASIC18.73■□□□□ 0.59
HACD3Q9P035 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HACD3Q9P035 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
HACD3Q9P035 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
HACD3Q9P035 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HACD3Q9P035 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.73■□□□□ 0.59
HACD3Q9P035 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
HACD3Q9P035 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HACD3Q9P035 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HACD3Q9P035 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HACD3Q9P035 AC026471.1-201ENST00000564629 3026 ntBASIC18.73■□□□□ 0.59
HACD3Q9P035 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HACD3Q9P035 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.73■□□□□ 0.59
HACD3Q9P035 CR769767.2-201ENST00000622735 460 ntBASIC18.73■□□□□ 0.59
HACD3Q9P035 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.73■□□□□ 0.59
HACD3Q9P035 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.73■□□□□ 0.59
HACD3Q9P035 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HACD3Q9P035 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
HACD3Q9P035 AC034236.2-201ENST00000606662 1610 ntBASIC18.73■□□□□ 0.59
HACD3Q9P035 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HACD3Q9P035 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms