Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
NCKIPSDQ9NZQ3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
NCKIPSDQ9NZQ3 AC007613.1-201ENST00000572811 2597 ntBASIC18.77■□□□□ 0.59
NCKIPSDQ9NZQ3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCKIPSDQ9NZQ3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCKIPSDQ9NZQ3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.76■□□□□ 0.59
NCKIPSDQ9NZQ3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.76■□□□□ 0.59
NCKIPSDQ9NZQ3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCKIPSDQ9NZQ3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.76■□□□□ 0.59
NCKIPSDQ9NZQ3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCKIPSDQ9NZQ3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCKIPSDQ9NZQ3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCKIPSDQ9NZQ3 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
NCKIPSDQ9NZQ3 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCKIPSDQ9NZQ3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCKIPSDQ9NZQ3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCKIPSDQ9NZQ3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
NCKIPSDQ9NZQ3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCKIPSDQ9NZQ3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.76■□□□□ 0.59
NCKIPSDQ9NZQ3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
NCKIPSDQ9NZQ3 YBX1P2-201ENST00000489612 999 ntBASIC18.76■□□□□ 0.59
NCKIPSDQ9NZQ3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.76■□□□□ 0.59
NCKIPSDQ9NZQ3 AC139887.4-201ENST00000607877 719 ntBASIC18.76■□□□□ 0.59
NCKIPSDQ9NZQ3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
NCKIPSDQ9NZQ3 AC141257.4-201ENST00000634557 245 ntBASIC18.76■□□□□ 0.59
NCKIPSDQ9NZQ3 AC136944.6-201ENST00000634818 245 ntBASIC18.76■□□□□ 0.59
NCKIPSDQ9NZQ3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.76■□□□□ 0.59
NCKIPSDQ9NZQ3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCKIPSDQ9NZQ3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCKIPSDQ9NZQ3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCKIPSDQ9NZQ3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.76■□□□□ 0.59
NCKIPSDQ9NZQ3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCKIPSDQ9NZQ3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCKIPSDQ9NZQ3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCKIPSDQ9NZQ3 AC090340.1-201ENST00000620778 4980 ntBASIC18.76■□□□□ 0.59
NCKIPSDQ9NZQ3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCKIPSDQ9NZQ3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCKIPSDQ9NZQ3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.76■□□□□ 0.59
NCKIPSDQ9NZQ3 AC135050.7-201ENST00000624508 2218 ntBASIC18.76■□□□□ 0.59
NCKIPSDQ9NZQ3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.75■□□□□ 0.59
NCKIPSDQ9NZQ3 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NCKIPSDQ9NZQ3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
NCKIPSDQ9NZQ3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NCKIPSDQ9NZQ3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
NCKIPSDQ9NZQ3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
NCKIPSDQ9NZQ3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NCKIPSDQ9NZQ3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.75■□□□□ 0.59
NCKIPSDQ9NZQ3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.75■□□□□ 0.59
NCKIPSDQ9NZQ3 AP000523.1-201ENST00000398242 1049 ntBASIC18.75■□□□□ 0.59
NCKIPSDQ9NZQ3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.75■□□□□ 0.59
NCKIPSDQ9NZQ3 HOMER2P1-201ENST00000455653 964 ntBASIC18.75■□□□□ 0.59
NCKIPSDQ9NZQ3 CKBP1-201ENST00000565489 1086 ntBASIC18.75■□□□□ 0.59
NCKIPSDQ9NZQ3 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.75■□□□□ 0.59
NCKIPSDQ9NZQ3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NCKIPSDQ9NZQ3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.75■□□□□ 0.59
NCKIPSDQ9NZQ3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.75■□□□□ 0.59
NCKIPSDQ9NZQ3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
NCKIPSDQ9NZQ3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.75■□□□□ 0.59
NCKIPSDQ9NZQ3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NCKIPSDQ9NZQ3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NCKIPSDQ9NZQ3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NCKIPSDQ9NZQ3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.75■□□□□ 0.59
NCKIPSDQ9NZQ3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.74■□□□□ 0.59
NCKIPSDQ9NZQ3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.74■□□□□ 0.59
NCKIPSDQ9NZQ3 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCKIPSDQ9NZQ3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCKIPSDQ9NZQ3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCKIPSDQ9NZQ3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.74■□□□□ 0.59
NCKIPSDQ9NZQ3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NCKIPSDQ9NZQ3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
NCKIPSDQ9NZQ3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.74■□□□□ 0.59
NCKIPSDQ9NZQ3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCKIPSDQ9NZQ3 AC005082.1-201ENST00000413042 2259 ntBASIC18.74■□□□□ 0.59
NCKIPSDQ9NZQ3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.74■□□□□ 0.59
NCKIPSDQ9NZQ3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NCKIPSDQ9NZQ3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.74■□□□□ 0.59
NCKIPSDQ9NZQ3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCKIPSDQ9NZQ3 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.74■□□□□ 0.59
NCKIPSDQ9NZQ3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.74■□□□□ 0.59
NCKIPSDQ9NZQ3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.74■□□□□ 0.59
NCKIPSDQ9NZQ3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCKIPSDQ9NZQ3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NCKIPSDQ9NZQ3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NCKIPSDQ9NZQ3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NCKIPSDQ9NZQ3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
NCKIPSDQ9NZQ3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
NCKIPSDQ9NZQ3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCKIPSDQ9NZQ3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCKIPSDQ9NZQ3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NCKIPSDQ9NZQ3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCKIPSDQ9NZQ3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCKIPSDQ9NZQ3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCKIPSDQ9NZQ3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCKIPSDQ9NZQ3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.73■□□□□ 0.59
NCKIPSDQ9NZQ3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NCKIPSDQ9NZQ3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
NCKIPSDQ9NZQ3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NCKIPSDQ9NZQ3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NCKIPSDQ9NZQ3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NCKIPSDQ9NZQ3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms