Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HCFC1R1Q9NWW0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HCFC1R1Q9NWW0 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HCFC1R1Q9NWW0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.24■□□□□ 0.67
HCFC1R1Q9NWW0 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
HCFC1R1Q9NWW0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HCFC1R1Q9NWW0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HCFC1R1Q9NWW0 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HCFC1R1Q9NWW0 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HCFC1R1Q9NWW0 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.24■□□□□ 0.67
HCFC1R1Q9NWW0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
HCFC1R1Q9NWW0 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.24■□□□□ 0.67
HCFC1R1Q9NWW0 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.24■□□□□ 0.67
HCFC1R1Q9NWW0 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HCFC1R1Q9NWW0 AC009065.1-201ENST00000564055 1225 ntBASIC19.24■□□□□ 0.67
HCFC1R1Q9NWW0 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.24■□□□□ 0.67
HCFC1R1Q9NWW0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.24■□□□□ 0.67
HCFC1R1Q9NWW0 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
HCFC1R1Q9NWW0 AC004263.2-201ENST00000617183 678 ntBASIC19.24■□□□□ 0.67
HCFC1R1Q9NWW0 AL049812.1-201ENST00000432563 2267 ntBASIC19.24■□□□□ 0.67
HCFC1R1Q9NWW0 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HCFC1R1Q9NWW0 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HCFC1R1Q9NWW0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.24■□□□□ 0.67
HCFC1R1Q9NWW0 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.24■□□□□ 0.67
HCFC1R1Q9NWW0 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.24■□□□□ 0.67
HCFC1R1Q9NWW0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HCFC1R1Q9NWW0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
HCFC1R1Q9NWW0 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.24■□□□□ 0.67
HCFC1R1Q9NWW0 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HCFC1R1Q9NWW0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HCFC1R1Q9NWW0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HCFC1R1Q9NWW0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HCFC1R1Q9NWW0 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HCFC1R1Q9NWW0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HCFC1R1Q9NWW0 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.23■□□□□ 0.67
HCFC1R1Q9NWW0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
HCFC1R1Q9NWW0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HCFC1R1Q9NWW0 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
HCFC1R1Q9NWW0 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HCFC1R1Q9NWW0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.23■□□□□ 0.67
HCFC1R1Q9NWW0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HCFC1R1Q9NWW0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HCFC1R1Q9NWW0 AL022342.1-201ENST00000400363 863 ntBASIC19.23■□□□□ 0.67
HCFC1R1Q9NWW0 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.23■□□□□ 0.67
HCFC1R1Q9NWW0 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.23■□□□□ 0.67
HCFC1R1Q9NWW0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
HCFC1R1Q9NWW0 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.23■□□□□ 0.67
HCFC1R1Q9NWW0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.23■□□□□ 0.67
HCFC1R1Q9NWW0 AL163051.1-201ENST00000569214 1512 ntBASIC19.23■□□□□ 0.67
HCFC1R1Q9NWW0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HCFC1R1Q9NWW0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.23■□□□□ 0.67
HCFC1R1Q9NWW0 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.23■□□□□ 0.67
HCFC1R1Q9NWW0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HCFC1R1Q9NWW0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HCFC1R1Q9NWW0 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.22■□□□□ 0.67
HCFC1R1Q9NWW0 KRT89P-201ENST00000620027 1478 ntBASIC19.22■□□□□ 0.67
HCFC1R1Q9NWW0 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HCFC1R1Q9NWW0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.22■□□□□ 0.67
HCFC1R1Q9NWW0 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HCFC1R1Q9NWW0 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HCFC1R1Q9NWW0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HCFC1R1Q9NWW0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HCFC1R1Q9NWW0 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.22■□□□□ 0.67
HCFC1R1Q9NWW0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
HCFC1R1Q9NWW0 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.22■□□□□ 0.67
HCFC1R1Q9NWW0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.22■□□□□ 0.67
HCFC1R1Q9NWW0 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HCFC1R1Q9NWW0 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.22■□□□□ 0.67
HCFC1R1Q9NWW0 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.22■□□□□ 0.67
HCFC1R1Q9NWW0 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.22■□□□□ 0.67
HCFC1R1Q9NWW0 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HCFC1R1Q9NWW0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.22■□□□□ 0.67
HCFC1R1Q9NWW0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
HCFC1R1Q9NWW0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HCFC1R1Q9NWW0 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.22■□□□□ 0.67
HCFC1R1Q9NWW0 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HCFC1R1Q9NWW0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HCFC1R1Q9NWW0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HCFC1R1Q9NWW0 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.21■□□□□ 0.67
HCFC1R1Q9NWW0 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.21■□□□□ 0.67
HCFC1R1Q9NWW0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HCFC1R1Q9NWW0 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.21■□□□□ 0.67
HCFC1R1Q9NWW0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HCFC1R1Q9NWW0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HCFC1R1Q9NWW0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HCFC1R1Q9NWW0 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HCFC1R1Q9NWW0 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HCFC1R1Q9NWW0 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HCFC1R1Q9NWW0 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HCFC1R1Q9NWW0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.21■□□□□ 0.67
HCFC1R1Q9NWW0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.21■□□□□ 0.67
HCFC1R1Q9NWW0 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HCFC1R1Q9NWW0 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.21■□□□□ 0.67
HCFC1R1Q9NWW0 VENTXP7-201ENST00000475503 772 ntBASIC19.21■□□□□ 0.67
HCFC1R1Q9NWW0 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.21■□□□□ 0.67
HCFC1R1Q9NWW0 AC106795.1-205ENST00000512851 1056 ntBASIC19.21■□□□□ 0.67
HCFC1R1Q9NWW0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
HCFC1R1Q9NWW0 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.21■□□□□ 0.67
HCFC1R1Q9NWW0 AL161938.1-201ENST00000569833 2180 ntBASIC19.21■□□□□ 0.67
HCFC1R1Q9NWW0 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms