Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AC138028.4-201ENST00000564984 1845 ntBASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 AC124283.5-201ENST00000624661 1809 ntBASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 KRT18P16-201ENST00000510337 1294 ntBASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2LQ9NUG4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.64■□□□□ 0.42
CCM2LQ9NUG4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCM2LQ9NUG4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCM2LQ9NUG4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCM2LQ9NUG4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.64■□□□□ 0.41
CCM2LQ9NUG4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CCM2LQ9NUG4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.64■□□□□ 0.41
CCM2LQ9NUG4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CCM2LQ9NUG4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCM2LQ9NUG4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCM2LQ9NUG4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.64■□□□□ 0.41
CCM2LQ9NUG4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCM2LQ9NUG4 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.64■□□□□ 0.41
CCM2LQ9NUG4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCM2LQ9NUG4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.64■□□□□ 0.41
CCM2LQ9NUG4 POM121L13P-201ENST00000422362 380 ntBASIC17.64■□□□□ 0.41
CCM2LQ9NUG4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.64■□□□□ 0.41
CCM2LQ9NUG4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCM2LQ9NUG4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCM2LQ9NUG4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.64■□□□□ 0.41
CCM2LQ9NUG4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.64■□□□□ 0.41
CCM2LQ9NUG4 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.64■□□□□ 0.41
CCM2LQ9NUG4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.64■□□□□ 0.41
CCM2LQ9NUG4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CCM2LQ9NUG4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
CCM2LQ9NUG4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CCM2LQ9NUG4 AC093677.2-201ENST00000600169 1863 ntBASIC17.64■□□□□ 0.41
CCM2LQ9NUG4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCM2LQ9NUG4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCM2LQ9NUG4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.64■□□□□ 0.41
CCM2LQ9NUG4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCM2LQ9NUG4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
CCM2LQ9NUG4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.64■□□□□ 0.41
CCM2LQ9NUG4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCM2LQ9NUG4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCM2LQ9NUG4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCM2LQ9NUG4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCM2LQ9NUG4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCM2LQ9NUG4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCM2LQ9NUG4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCM2LQ9NUG4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCM2LQ9NUG4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCM2LQ9NUG4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCM2LQ9NUG4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.63■□□□□ 0.41
CCM2LQ9NUG4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.63■□□□□ 0.41
CCM2LQ9NUG4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCM2LQ9NUG4 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCM2LQ9NUG4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCM2LQ9NUG4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.63■□□□□ 0.41
CCM2LQ9NUG4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCM2LQ9NUG4 AC087499.1-201ENST00000418141 1075 ntBASIC17.63■□□□□ 0.41
CCM2LQ9NUG4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.63■□□□□ 0.41
CCM2LQ9NUG4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.63■□□□□ 0.41
CCM2LQ9NUG4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.63■□□□□ 0.41
CCM2LQ9NUG4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.63■□□□□ 0.41
CCM2LQ9NUG4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.63■□□□□ 0.41
CCM2LQ9NUG4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.63■□□□□ 0.41
CCM2LQ9NUG4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
CCM2LQ9NUG4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCM2LQ9NUG4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CCM2LQ9NUG4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCM2LQ9NUG4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms