Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
POLE3Q9NRF9 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
POLE3Q9NRF9 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
POLE3Q9NRF9 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
POLE3Q9NRF9 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.24■□□□□ 0.35
POLE3Q9NRF9 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
POLE3Q9NRF9 AC009113.1-201ENST00000570267 2443 ntBASIC17.23■□□□□ 0.35
POLE3Q9NRF9 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
POLE3Q9NRF9 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
POLE3Q9NRF9 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
POLE3Q9NRF9 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
POLE3Q9NRF9 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.23■□□□□ 0.35
POLE3Q9NRF9 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
POLE3Q9NRF9 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
POLE3Q9NRF9 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
POLE3Q9NRF9 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
POLE3Q9NRF9 AC008556.1-201ENST00000610908 2040 ntBASIC17.23■□□□□ 0.35
POLE3Q9NRF9 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.23■□□□□ 0.35
POLE3Q9NRF9 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.23■□□□□ 0.35
POLE3Q9NRF9 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
POLE3Q9NRF9 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.23■□□□□ 0.35
POLE3Q9NRF9 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
POLE3Q9NRF9 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.23■□□□□ 0.35
POLE3Q9NRF9 TSPY17P-201ENST00000450329 467 ntBASIC17.23■□□□□ 0.35
POLE3Q9NRF9 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.23■□□□□ 0.35
POLE3Q9NRF9 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.23■□□□□ 0.35
POLE3Q9NRF9 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
POLE3Q9NRF9 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
POLE3Q9NRF9 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.23■□□□□ 0.35
POLE3Q9NRF9 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
POLE3Q9NRF9 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
POLE3Q9NRF9 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
POLE3Q9NRF9 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
POLE3Q9NRF9 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
POLE3Q9NRF9 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
POLE3Q9NRF9 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
POLE3Q9NRF9 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
POLE3Q9NRF9 GPAT2P1-201ENST00000444924 1672 ntBASIC17.23■□□□□ 0.35
POLE3Q9NRF9 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.23■□□□□ 0.35
POLE3Q9NRF9 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
POLE3Q9NRF9 AC034236.2-201ENST00000606662 1610 ntBASIC17.21■□□□□ 0.35
POLE3Q9NRF9 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.21■□□□□ 0.35
POLE3Q9NRF9 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
POLE3Q9NRF9 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
POLE3Q9NRF9 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
POLE3Q9NRF9 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
POLE3Q9NRF9 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
POLE3Q9NRF9 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
POLE3Q9NRF9 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
POLE3Q9NRF9 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
POLE3Q9NRF9 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
POLE3Q9NRF9 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
POLE3Q9NRF9 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
POLE3Q9NRF9 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
POLE3Q9NRF9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.21■□□□□ 0.35
POLE3Q9NRF9 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.21■□□□□ 0.35
POLE3Q9NRF9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
POLE3Q9NRF9 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.21■□□□□ 0.35
POLE3Q9NRF9 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
POLE3Q9NRF9 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms