Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1BQ9H9Y6 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
POLR1BQ9H9Y6 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.35■□□□□ 0.53
POLR1BQ9H9Y6 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 KRT8P45-201ENST00000414328 1447 ntBASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
POLR1BQ9H9Y6 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
POLR1BQ9H9Y6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
POLR1BQ9H9Y6 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
POLR1BQ9H9Y6 LINC01465-201ENST00000408887 1940 ntBASIC18.33■□□□□ 0.53
POLR1BQ9H9Y6 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
POLR1BQ9H9Y6 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
POLR1BQ9H9Y6 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
POLR1BQ9H9Y6 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.33■□□□□ 0.53
POLR1BQ9H9Y6 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.33■□□□□ 0.53
POLR1BQ9H9Y6 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.33■□□□□ 0.53
POLR1BQ9H9Y6 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
POLR1BQ9H9Y6 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
POLR1BQ9H9Y6 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
POLR1BQ9H9Y6 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
POLR1BQ9H9Y6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
POLR1BQ9H9Y6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLR1BQ9H9Y6 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
POLR1BQ9H9Y6 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
POLR1BQ9H9Y6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.33■□□□□ 0.52
POLR1BQ9H9Y6 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLR1BQ9H9Y6 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.33■□□□□ 0.52
POLR1BQ9H9Y6 AC112907.2-201ENST00000448639 330 ntBASIC18.33■□□□□ 0.52
POLR1BQ9H9Y6 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.33■□□□□ 0.52
POLR1BQ9H9Y6 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLR1BQ9H9Y6 ZNF444P1-201ENST00000559497 298 ntBASIC18.33■□□□□ 0.52
POLR1BQ9H9Y6 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.33■□□□□ 0.52
POLR1BQ9H9Y6 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLR1BQ9H9Y6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
POLR1BQ9H9Y6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
POLR1BQ9H9Y6 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
POLR1BQ9H9Y6 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLR1BQ9H9Y6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
POLR1BQ9H9Y6 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLR1BQ9H9Y6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
POLR1BQ9H9Y6 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
POLR1BQ9H9Y6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
POLR1BQ9H9Y6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
POLR1BQ9H9Y6 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
POLR1BQ9H9Y6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
POLR1BQ9H9Y6 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
POLR1BQ9H9Y6 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.32■□□□□ 0.52
POLR1BQ9H9Y6 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.32■□□□□ 0.52
POLR1BQ9H9Y6 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
POLR1BQ9H9Y6 NEK4P2-201ENST00000580004 1012 ntBASIC18.32■□□□□ 0.52
POLR1BQ9H9Y6 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
POLR1BQ9H9Y6 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
POLR1BQ9H9Y6 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.32■□□□□ 0.52
POLR1BQ9H9Y6 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
POLR1BQ9H9Y6 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
POLR1BQ9H9Y6 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
POLR1BQ9H9Y6 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
POLR1BQ9H9Y6 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
POLR1BQ9H9Y6 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.32■□□□□ 0.52
POLR1BQ9H9Y6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
POLR1BQ9H9Y6 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.32■□□□□ 0.52
POLR1BQ9H9Y6 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms