Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
TUBB1Q9H4B7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TUBB1Q9H4B7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.89■□□□□ 0.45
TUBB1Q9H4B7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TUBB1Q9H4B7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TUBB1Q9H4B7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TUBB1Q9H4B7 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TUBB1Q9H4B7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TUBB1Q9H4B7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TUBB1Q9H4B7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TUBB1Q9H4B7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.88■□□□□ 0.45
TUBB1Q9H4B7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TUBB1Q9H4B7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TUBB1Q9H4B7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.88■□□□□ 0.45
TUBB1Q9H4B7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
TUBB1Q9H4B7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TUBB1Q9H4B7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TUBB1Q9H4B7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.88■□□□□ 0.45
TUBB1Q9H4B7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TUBB1Q9H4B7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TUBB1Q9H4B7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.88■□□□□ 0.45
TUBB1Q9H4B7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.88■□□□□ 0.45
TUBB1Q9H4B7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.88■□□□□ 0.45
TUBB1Q9H4B7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TUBB1Q9H4B7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TUBB1Q9H4B7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TUBB1Q9H4B7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.88■□□□□ 0.45
TUBB1Q9H4B7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.88■□□□□ 0.45
TUBB1Q9H4B7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
TUBB1Q9H4B7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.88■□□□□ 0.45
TUBB1Q9H4B7 LTB4R2-202ENST00000528054 3092 ntBASIC17.88■□□□□ 0.45
TUBB1Q9H4B7 AC134043.2-201ENST00000624206 2238 ntBASIC17.88■□□□□ 0.45
TUBB1Q9H4B7 AC096733.2-201ENST00000609937 1394 ntBASIC17.88■□□□□ 0.45
TUBB1Q9H4B7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TUBB1Q9H4B7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TUBB1Q9H4B7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TUBB1Q9H4B7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.88■□□□□ 0.45
TUBB1Q9H4B7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TUBB1Q9H4B7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
TUBB1Q9H4B7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.87■□□□□ 0.45
TUBB1Q9H4B7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TUBB1Q9H4B7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TUBB1Q9H4B7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TUBB1Q9H4B7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TUBB1Q9H4B7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TUBB1Q9H4B7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TUBB1Q9H4B7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
TUBB1Q9H4B7 AC099343.3-201ENST00000605834 2503 ntBASIC17.87■□□□□ 0.45
TUBB1Q9H4B7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TUBB1Q9H4B7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TUBB1Q9H4B7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.87■□□□□ 0.45
TUBB1Q9H4B7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.87■□□□□ 0.45
TUBB1Q9H4B7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.87■□□□□ 0.45
TUBB1Q9H4B7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.87■□□□□ 0.45
TUBB1Q9H4B7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TUBB1Q9H4B7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
TUBB1Q9H4B7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TUBB1Q9H4B7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TUBB1Q9H4B7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TUBB1Q9H4B7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TUBB1Q9H4B7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TUBB1Q9H4B7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TUBB1Q9H4B7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TUBB1Q9H4B7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TUBB1Q9H4B7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TUBB1Q9H4B7 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TUBB1Q9H4B7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TUBB1Q9H4B7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TUBB1Q9H4B7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TUBB1Q9H4B7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TUBB1Q9H4B7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TUBB1Q9H4B7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TUBB1Q9H4B7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TUBB1Q9H4B7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TUBB1Q9H4B7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TUBB1Q9H4B7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.86■□□□□ 0.45
TUBB1Q9H4B7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.86■□□□□ 0.45
TUBB1Q9H4B7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.86■□□□□ 0.45
TUBB1Q9H4B7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.86■□□□□ 0.45
TUBB1Q9H4B7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.86■□□□□ 0.45
TUBB1Q9H4B7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.86■□□□□ 0.45
TUBB1Q9H4B7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TUBB1Q9H4B7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.86■□□□□ 0.45
TUBB1Q9H4B7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TUBB1Q9H4B7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TUBB1Q9H4B7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TUBB1Q9H4B7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TUBB1Q9H4B7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TUBB1Q9H4B7 KRT8P50-201ENST00000562022 1438 ntBASIC17.86■□□□□ 0.45
TUBB1Q9H4B7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TUBB1Q9H4B7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TUBB1Q9H4B7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TUBB1Q9H4B7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.86■□□□□ 0.45
TUBB1Q9H4B7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TUBB1Q9H4B7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.86■□□□□ 0.45
TUBB1Q9H4B7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TUBB1Q9H4B7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TUBB1Q9H4B7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.86■□□□□ 0.45
TUBB1Q9H4B7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TUBB1Q9H4B7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms