Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC3Q9BY71 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.33■□□□□ 0.68
LRRC3Q9BY71 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
LRRC3Q9BY71 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC3Q9BY71 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC3Q9BY71 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC3Q9BY71 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.33■□□□□ 0.68
LRRC3Q9BY71 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
LRRC3Q9BY71 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.33■□□□□ 0.68
LRRC3Q9BY71 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC3Q9BY71 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC3Q9BY71 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.32■□□□□ 0.68
LRRC3Q9BY71 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.32■□□□□ 0.68
LRRC3Q9BY71 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC3Q9BY71 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC3Q9BY71 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.32■□□□□ 0.68
LRRC3Q9BY71 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC3Q9BY71 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC3Q9BY71 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC3Q9BY71 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC3Q9BY71 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC3Q9BY71 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC3Q9BY71 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.32■□□□□ 0.68
LRRC3Q9BY71 LINC00265-3P-201ENST00000447588 903 ntBASIC19.32■□□□□ 0.68
LRRC3Q9BY71 TOB2P1-201ENST00000469761 992 ntBASIC19.32■□□□□ 0.68
LRRC3Q9BY71 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC3Q9BY71 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
LRRC3Q9BY71 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LRRC3Q9BY71 AC090616.6-201ENST00000582640 721 ntBASIC19.32■□□□□ 0.68
LRRC3Q9BY71 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.32■□□□□ 0.68
LRRC3Q9BY71 GPR32P1-201ENST00000601788 811 ntBASIC19.32■□□□□ 0.68
LRRC3Q9BY71 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC3Q9BY71 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.32■□□□□ 0.68
LRRC3Q9BY71 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.32■□□□□ 0.68
LRRC3Q9BY71 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC3Q9BY71 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC3Q9BY71 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC3Q9BY71 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.32■□□□□ 0.68
LRRC3Q9BY71 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.32■□□□□ 0.68
LRRC3Q9BY71 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
LRRC3Q9BY71 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC3Q9BY71 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC3Q9BY71 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
LRRC3Q9BY71 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
LRRC3Q9BY71 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
LRRC3Q9BY71 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC3Q9BY71 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC3Q9BY71 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.31■□□□□ 0.68
LRRC3Q9BY71 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.31■□□□□ 0.68
LRRC3Q9BY71 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC3Q9BY71 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.31■□□□□ 0.68
LRRC3Q9BY71 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC3Q9BY71 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
LRRC3Q9BY71 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
LRRC3Q9BY71 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.31■□□□□ 0.68
LRRC3Q9BY71 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
LRRC3Q9BY71 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC3Q9BY71 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC3Q9BY71 AC246785.2-201ENST00000432512 513 ntBASIC19.31■□□□□ 0.68
LRRC3Q9BY71 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC3Q9BY71 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.31■□□□□ 0.68
LRRC3Q9BY71 AC024563.2-201ENST00000603282 481 ntBASIC19.31■□□□□ 0.68
LRRC3Q9BY71 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.31■□□□□ 0.68
LRRC3Q9BY71 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC3Q9BY71 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC3Q9BY71 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.31■□□□□ 0.68
LRRC3Q9BY71 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC3Q9BY71 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC3Q9BY71 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
LRRC3Q9BY71 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
LRRC3Q9BY71 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
LRRC3Q9BY71 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC3Q9BY71 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.3■□□□□ 0.68
LRRC3Q9BY71 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.3■□□□□ 0.68
LRRC3Q9BY71 AC087289.5-201ENST00000586076 3175 ntBASIC19.3■□□□□ 0.68
LRRC3Q9BY71 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC3Q9BY71 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC3Q9BY71 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC3Q9BY71 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC3Q9BY71 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
LRRC3Q9BY71 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC3Q9BY71 AL845331.1-201ENST00000424978 1190 ntBASIC19.3■□□□□ 0.68
LRRC3Q9BY71 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.3■□□□□ 0.68
LRRC3Q9BY71 RN7SL606P-201ENST00000472779 293 ntBASIC19.3■□□□□ 0.68
LRRC3Q9BY71 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC3Q9BY71 AP000867.3-201ENST00000524675 377 ntBASIC19.3■□□□□ 0.68
LRRC3Q9BY71 AC012615.1-201ENST00000565797 1299 ntBASIC19.3■□□□□ 0.68
LRRC3Q9BY71 AC111152.3-201ENST00000569699 673 ntBASIC19.3■□□□□ 0.68
LRRC3Q9BY71 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LRRC3Q9BY71 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC3Q9BY71 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC3Q9BY71 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC3Q9BY71 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC3Q9BY71 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC3Q9BY71 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC3Q9BY71 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC3Q9BY71 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.29■□□□□ 0.68
LRRC3Q9BY71 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC3Q9BY71 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC3Q9BY71 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms