Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 IRX1P1-201ENST00000438849 1838 ntBASIC11.05□□□□□ -0.64
LIMD2Q9BT23 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 PTGES2-AS1-201ENST00000443493 2100 ntBASIC11.05□□□□□ -0.64
LIMD2Q9BT23 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 AL513477.1-201ENST00000602865 2407 ntBASIC11.05□□□□□ -0.64
LIMD2Q9BT23 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 AC012313.1-201ENST00000593393 3059 ntBASIC11.05□□□□□ -0.64
LIMD2Q9BT23 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 AC006058.3-201ENST00000606217 1069 ntBASIC11.05□□□□□ -0.64
LIMD2Q9BT23 Six3os1_6.1-201ENST00000620790 196 ntBASIC11.05□□□□□ -0.64
LIMD2Q9BT23 AL023875.1-201ENST00000640777 796 ntBASIC11.05□□□□□ -0.64
LIMD2Q9BT23 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 AC063926.3-201ENST00000624734 5658 ntBASIC11.05□□□□□ -0.64
LIMD2Q9BT23 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 FP475955.4-201ENST00000623131 1990 ntBASIC11.05□□□□□ -0.64
LIMD2Q9BT23 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LIMD2Q9BT23 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 FAM201B-201ENST00000458407 597 ntBASIC11.04□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms