Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPPED1Q9BRF8 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.46■□□□□ 0.39
CPPED1Q9BRF8 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
CPPED1Q9BRF8 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPPED1Q9BRF8 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.46■□□□□ 0.39
CPPED1Q9BRF8 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.46■□□□□ 0.39
CPPED1Q9BRF8 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.46■□□□□ 0.39
CPPED1Q9BRF8 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CPPED1Q9BRF8 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPPED1Q9BRF8 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CPPED1Q9BRF8 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CPPED1Q9BRF8 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CPPED1Q9BRF8 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.46■□□□□ 0.38
CPPED1Q9BRF8 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CPPED1Q9BRF8 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPPED1Q9BRF8 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CPPED1Q9BRF8 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPPED1Q9BRF8 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPPED1Q9BRF8 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
CPPED1Q9BRF8 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CPPED1Q9BRF8 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPPED1Q9BRF8 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPPED1Q9BRF8 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CPPED1Q9BRF8 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CPPED1Q9BRF8 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPPED1Q9BRF8 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPPED1Q9BRF8 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPPED1Q9BRF8 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPPED1Q9BRF8 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.45■□□□□ 0.38
CPPED1Q9BRF8 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPPED1Q9BRF8 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.45■□□□□ 0.38
CPPED1Q9BRF8 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPPED1Q9BRF8 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPPED1Q9BRF8 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPPED1Q9BRF8 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPPED1Q9BRF8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.44■□□□□ 0.38
CPPED1Q9BRF8 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPPED1Q9BRF8 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPPED1Q9BRF8 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPPED1Q9BRF8 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPPED1Q9BRF8 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.44■□□□□ 0.38
CPPED1Q9BRF8 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPPED1Q9BRF8 FLJ13224-201ENST00000313737 1514 ntBASIC17.44■□□□□ 0.38
CPPED1Q9BRF8 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.44■□□□□ 0.38
CPPED1Q9BRF8 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPPED1Q9BRF8 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPPED1Q9BRF8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPPED1Q9BRF8 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.44■□□□□ 0.38
CPPED1Q9BRF8 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.44■□□□□ 0.38
CPPED1Q9BRF8 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CPPED1Q9BRF8 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.44■□□□□ 0.38
CPPED1Q9BRF8 AC008622.2-201ENST00000617006 1229 ntBASIC17.44■□□□□ 0.38
CPPED1Q9BRF8 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CPPED1Q9BRF8 AL031985.4-201ENST00000642138 673 ntBASIC17.44■□□□□ 0.38
CPPED1Q9BRF8 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CPPED1Q9BRF8 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CPPED1Q9BRF8 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPPED1Q9BRF8 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPPED1Q9BRF8 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.44■□□□□ 0.38
CPPED1Q9BRF8 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPPED1Q9BRF8 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.44■□□□□ 0.38
CPPED1Q9BRF8 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CPPED1Q9BRF8 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPPED1Q9BRF8 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CPPED1Q9BRF8 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.43■□□□□ 0.38
CPPED1Q9BRF8 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPPED1Q9BRF8 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPPED1Q9BRF8 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.43■□□□□ 0.38
CPPED1Q9BRF8 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.43■□□□□ 0.38
CPPED1Q9BRF8 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CPPED1Q9BRF8 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPPED1Q9BRF8 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPPED1Q9BRF8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPPED1Q9BRF8 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.43■□□□□ 0.38
CPPED1Q9BRF8 AL353807.1-201ENST00000427475 662 ntBASIC17.43■□□□□ 0.38
CPPED1Q9BRF8 FAM207BP-201ENST00000447172 505 ntBASIC17.43■□□□□ 0.38
CPPED1Q9BRF8 AC011506.1-201ENST00000474329 610 ntBASIC17.43■□□□□ 0.38
CPPED1Q9BRF8 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
CPPED1Q9BRF8 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CPPED1Q9BRF8 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.43■□□□□ 0.38
CPPED1Q9BRF8 AC130371.2-201ENST00000619443 611 ntBASIC17.43■□□□□ 0.38
CPPED1Q9BRF8 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CPPED1Q9BRF8 CR392000.1-201ENST00000624770 1228 ntBASIC17.43■□□□□ 0.38
CPPED1Q9BRF8 AC073648.6-201ENST00000641589 218 ntBASIC17.43■□□□□ 0.38
CPPED1Q9BRF8 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.43■□□□□ 0.38
CPPED1Q9BRF8 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.43■□□□□ 0.38
CPPED1Q9BRF8 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.43■□□□□ 0.38
CPPED1Q9BRF8 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPPED1Q9BRF8 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPPED1Q9BRF8 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.43■□□□□ 0.38
CPPED1Q9BRF8 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.43■□□□□ 0.38
CPPED1Q9BRF8 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPPED1Q9BRF8 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.42■□□□□ 0.38
CPPED1Q9BRF8 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPPED1Q9BRF8 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPPED1Q9BRF8 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CPPED1Q9BRF8 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CPPED1Q9BRF8 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CPPED1Q9BRF8 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPPED1Q9BRF8 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms