Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMOQ99835 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.42■□□□□ 0.7
SMOQ99835 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMOQ99835 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SMOQ99835 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMOQ99835 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMOQ99835 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMOQ99835 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMOQ99835 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.42■□□□□ 0.7
SMOQ99835 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMOQ99835 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMOQ99835 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMOQ99835 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMOQ99835 MIR149-201ENST00000384879 89 ntBASIC19.42■□□□□ 0.7
SMOQ99835 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMOQ99835 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMOQ99835 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMOQ99835 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMOQ99835 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.42■□□□□ 0.7
SMOQ99835 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.42■□□□□ 0.7
SMOQ99835 AC009065.1-201ENST00000564055 1225 ntBASIC19.42■□□□□ 0.7
SMOQ99835 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.42■□□□□ 0.7
SMOQ99835 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.42■□□□□ 0.7
SMOQ99835 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.42■□□□□ 0.7
SMOQ99835 AP000550.4-202ENST00000639755 178 ntBASIC19.42■□□□□ 0.7
SMOQ99835 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMOQ99835 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMOQ99835 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMOQ99835 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMOQ99835 SDHAP2-201ENST00000455183 2001 ntBASIC19.42■□□□□ 0.7
SMOQ99835 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.42■□□□□ 0.7
SMOQ99835 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMOQ99835 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMOQ99835 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMOQ99835 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.42■□□□□ 0.7
SMOQ99835 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMOQ99835 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMOQ99835 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMOQ99835 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMOQ99835 MIR662-201ENST00000384847 95 ntBASIC19.41■□□□□ 0.7
SMOQ99835 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.41■□□□□ 0.7
SMOQ99835 AL645929.1-201ENST00000420084 975 ntBASIC19.41■□□□□ 0.7
SMOQ99835 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMOQ99835 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.41■□□□□ 0.7
SMOQ99835 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.41■□□□□ 0.7
SMOQ99835 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SMOQ99835 AC091076.1-201ENST00000610741 619 ntBASIC19.41■□□□□ 0.7
SMOQ99835 IER3-202ENST00000376377 1350 ntBASIC19.41■□□□□ 0.7
SMOQ99835 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.41■□□□□ 0.7
SMOQ99835 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMOQ99835 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.41■□□□□ 0.7
SMOQ99835 AC009102.3-201ENST00000623118 1491 ntBASIC19.41■□□□□ 0.7
SMOQ99835 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMOQ99835 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMOQ99835 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SMOQ99835 AC126763.1-201ENST00000552015 2118 ntBASIC19.4■□□□□ 0.7
SMOQ99835 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
SMOQ99835 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SMOQ99835 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
SMOQ99835 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.4■□□□□ 0.7
SMOQ99835 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.4■□□□□ 0.7
SMOQ99835 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.4■□□□□ 0.7
SMOQ99835 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.4■□□□□ 0.7
SMOQ99835 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SMOQ99835 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SMOQ99835 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMOQ99835 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMOQ99835 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SMOQ99835 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMOQ99835 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMOQ99835 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMOQ99835 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.4■□□□□ 0.7
SMOQ99835 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMOQ99835 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SMOQ99835 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SMOQ99835 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMOQ99835 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMOQ99835 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMOQ99835 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMOQ99835 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.39■□□□□ 0.69
SMOQ99835 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMOQ99835 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.39■□□□□ 0.69
SMOQ99835 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.39■□□□□ 0.69
SMOQ99835 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.39■□□□□ 0.69
SMOQ99835 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.39■□□□□ 0.69
SMOQ99835 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.39■□□□□ 0.69
SMOQ99835 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.39■□□□□ 0.69
SMOQ99835 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
SMOQ99835 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMOQ99835 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.39■□□□□ 0.69
SMOQ99835 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMOQ99835 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMOQ99835 AL162741.1-201ENST00000565563 1558 ntBASIC19.39■□□□□ 0.69
SMOQ99835 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMOQ99835 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMOQ99835 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMOQ99835 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMOQ99835 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SMOQ99835 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMOQ99835 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms