Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.88■□□□□ 0.29
NPAS1Q99742 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS1Q99742 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
NPAS1Q99742 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS1Q99742 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS1Q99742 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS1Q99742 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS1Q99742 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.88■□□□□ 0.29
NPAS1Q99742 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS1Q99742 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS1Q99742 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NPAS1Q99742 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS1Q99742 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NPAS1Q99742 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
NPAS1Q99742 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS1Q99742 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.87■□□□□ 0.29
NPAS1Q99742 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.87■□□□□ 0.29
NPAS1Q99742 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS1Q99742 AC126763.1-201ENST00000552015 2118 ntBASIC16.87■□□□□ 0.29
NPAS1Q99742 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.87■□□□□ 0.29
NPAS1Q99742 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.87■□□□□ 0.29
NPAS1Q99742 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS1Q99742 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS1Q99742 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
NPAS1Q99742 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS1Q99742 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.87■□□□□ 0.29
NPAS1Q99742 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
NPAS1Q99742 ATP5G1P1-201ENST00000448724 379 ntBASIC16.87■□□□□ 0.29
NPAS1Q99742 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.87■□□□□ 0.29
NPAS1Q99742 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.87■□□□□ 0.29
NPAS1Q99742 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.87■□□□□ 0.29
NPAS1Q99742 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.87■□□□□ 0.29
NPAS1Q99742 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.87■□□□□ 0.29
NPAS1Q99742 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.87■□□□□ 0.29
NPAS1Q99742 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS1Q99742 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS1Q99742 WIZP1-201ENST00000531444 2299 ntBASIC16.87■□□□□ 0.29
NPAS1Q99742 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.87■□□□□ 0.29
NPAS1Q99742 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS1Q99742 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS1Q99742 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS1Q99742 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.87■□□□□ 0.29
NPAS1Q99742 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS1Q99742 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS1Q99742 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
NPAS1Q99742 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.87■□□□□ 0.29
NPAS1Q99742 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.87■□□□□ 0.29
NPAS1Q99742 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.86■□□□□ 0.29
NPAS1Q99742 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS1Q99742 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS1Q99742 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS1Q99742 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS1Q99742 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.86■□□□□ 0.29
NPAS1Q99742 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
NPAS1Q99742 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS1Q99742 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.86■□□□□ 0.29
NPAS1Q99742 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS1Q99742 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS1Q99742 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS1Q99742 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.86■□□□□ 0.29
NPAS1Q99742 AC117947.1-201ENST00000427448 529 ntBASIC16.86■□□□□ 0.29
NPAS1Q99742 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.86■□□□□ 0.29
NPAS1Q99742 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.86■□□□□ 0.29
NPAS1Q99742 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.86■□□□□ 0.29
NPAS1Q99742 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS1Q99742 AC139887.4-201ENST00000607877 719 ntBASIC16.86■□□□□ 0.29
NPAS1Q99742 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.86■□□□□ 0.29
NPAS1Q99742 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.86■□□□□ 0.29
NPAS1Q99742 AC092865.7-201ENST00000641832 219 ntBASIC16.86■□□□□ 0.29
NPAS1Q99742 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS1Q99742 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS1Q99742 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
NPAS1Q99742 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS1Q99742 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS1Q99742 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.86■□□□□ 0.29
NPAS1Q99742 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS1Q99742 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
NPAS1Q99742 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
NPAS1Q99742 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
NPAS1Q99742 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.86■□□□□ 0.29
NPAS1Q99742 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
NPAS1Q99742 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS1Q99742 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS1Q99742 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS1Q99742 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.86■□□□□ 0.29
NPAS1Q99742 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS1Q99742 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
NPAS1Q99742 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS1Q99742 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.85■□□□□ 0.29
NPAS1Q99742 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS1Q99742 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
NPAS1Q99742 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS1Q99742 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS1Q99742 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS1Q99742 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS1Q99742 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS1Q99742 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
NPAS1Q99742 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.85■□□□□ 0.29
NPAS1Q99742 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS1Q99742 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms