Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NEK1Q96PY6 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NEK1Q96PY6 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NEK1Q96PY6 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
NEK1Q96PY6 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NEK1Q96PY6 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NEK1Q96PY6 KRT18P23-201ENST00000435622 1283 ntBASIC21.94■■□□□ 1.1
NEK1Q96PY6 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.94■■□□□ 1.1
NEK1Q96PY6 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NEK1Q96PY6 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.94■■□□□ 1.1
NEK1Q96PY6 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.94■■□□□ 1.1
NEK1Q96PY6 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
NEK1Q96PY6 KRT8P7-201ENST00000533003 1432 ntBASIC21.94■■□□□ 1.1
NEK1Q96PY6 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.94■■□□□ 1.1
NEK1Q96PY6 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NEK1Q96PY6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC21.94■■□□□ 1.1
NEK1Q96PY6 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.94■■□□□ 1.1
NEK1Q96PY6 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.94■■□□□ 1.1
NEK1Q96PY6 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NEK1Q96PY6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NEK1Q96PY6 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.94■■□□□ 1.1
NEK1Q96PY6 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
NEK1Q96PY6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NEK1Q96PY6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NEK1Q96PY6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
NEK1Q96PY6 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.93■■□□□ 1.1
NEK1Q96PY6 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
NEK1Q96PY6 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NEK1Q96PY6 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NEK1Q96PY6 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
NEK1Q96PY6 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
NEK1Q96PY6 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.93■■□□□ 1.1
NEK1Q96PY6 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NEK1Q96PY6 AC211429.1-201ENST00000415277 523 ntBASIC21.93■■□□□ 1.1
NEK1Q96PY6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.93■■□□□ 1.1
NEK1Q96PY6 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NEK1Q96PY6 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NEK1Q96PY6 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC21.93■■□□□ 1.1
NEK1Q96PY6 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.93■■□□□ 1.1
NEK1Q96PY6 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.93■■□□□ 1.1
NEK1Q96PY6 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
NEK1Q96PY6 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NEK1Q96PY6 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NEK1Q96PY6 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
NEK1Q96PY6 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NEK1Q96PY6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NEK1Q96PY6 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
NEK1Q96PY6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.92■■□□□ 1.1
NEK1Q96PY6 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NEK1Q96PY6 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
NEK1Q96PY6 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NEK1Q96PY6 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NEK1Q96PY6 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.92■■□□□ 1.1
NEK1Q96PY6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.92■■□□□ 1.1
NEK1Q96PY6 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.92■■□□□ 1.1
NEK1Q96PY6 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NEK1Q96PY6 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.92■■□□□ 1.1
NEK1Q96PY6 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.92■■□□□ 1.1
NEK1Q96PY6 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NEK1Q96PY6 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.92■■□□□ 1.1
NEK1Q96PY6 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
NEK1Q96PY6 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
NEK1Q96PY6 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.92■■□□□ 1.1
NEK1Q96PY6 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NEK1Q96PY6 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NEK1Q96PY6 AL354751.1-201ENST00000412768 1863 ntBASIC21.92■■□□□ 1.1
NEK1Q96PY6 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NEK1Q96PY6 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
NEK1Q96PY6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NEK1Q96PY6 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.91■■□□□ 1.1
NEK1Q96PY6 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.91■■□□□ 1.1
NEK1Q96PY6 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
NEK1Q96PY6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NEK1Q96PY6 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NEK1Q96PY6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NEK1Q96PY6 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
NEK1Q96PY6 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NEK1Q96PY6 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
NEK1Q96PY6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NEK1Q96PY6 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
NEK1Q96PY6 HMGA1P5-201ENST00000412453 271 ntBASIC21.91■■□□□ 1.1
NEK1Q96PY6 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NEK1Q96PY6 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.91■■□□□ 1.1
NEK1Q96PY6 LINC01023-201ENST00000606054 436 ntBASIC21.91■■□□□ 1.1
NEK1Q96PY6 AL390961.4-201ENST00000623958 2535 ntBASIC21.91■■□□□ 1.1
NEK1Q96PY6 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NEK1Q96PY6 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NEK1Q96PY6 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NEK1Q96PY6 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
NEK1Q96PY6 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
NEK1Q96PY6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
NEK1Q96PY6 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
NEK1Q96PY6 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.9■■□□□ 1.1
NEK1Q96PY6 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NEK1Q96PY6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.9■■□□□ 1.1
NEK1Q96PY6 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
NEK1Q96PY6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NEK1Q96PY6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
NEK1Q96PY6 KRT18P22-201ENST00000402024 1347 ntBASIC21.9■■□□□ 1.1
NEK1Q96PY6 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms