Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RPRD1AQ96P16 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.11■□□□□ 0.65
RPRD1AQ96P16 HCG11-201ENST00000411553 5696 ntBASIC19.11■□□□□ 0.65
RPRD1AQ96P16 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPRD1AQ96P16 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPRD1AQ96P16 AL499627.1-201ENST00000569373 2188 ntBASIC19.1■□□□□ 0.65
RPRD1AQ96P16 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPRD1AQ96P16 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPRD1AQ96P16 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RPRD1AQ96P16 KRT8P50-201ENST00000562022 1438 ntBASIC19.1■□□□□ 0.65
RPRD1AQ96P16 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPRD1AQ96P16 ARMC10P1-201ENST00000313754 855 ntBASIC19.1■□□□□ 0.65
RPRD1AQ96P16 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPRD1AQ96P16 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RPRD1AQ96P16 KRT18P41-201ENST00000518924 1277 ntBASIC19.1■□□□□ 0.65
RPRD1AQ96P16 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPRD1AQ96P16 MIR3917-201ENST00000580971 93 ntBASIC19.1■□□□□ 0.65
RPRD1AQ96P16 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.1■□□□□ 0.65
RPRD1AQ96P16 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPRD1AQ96P16 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RPRD1AQ96P16 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RPRD1AQ96P16 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RPRD1AQ96P16 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPRD1AQ96P16 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPRD1AQ96P16 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPRD1AQ96P16 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPRD1AQ96P16 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPRD1AQ96P16 CROCCP3-202ENST00000420820 1947 ntBASIC19.1■□□□□ 0.65
RPRD1AQ96P16 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPRD1AQ96P16 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPRD1AQ96P16 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPRD1AQ96P16 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RPRD1AQ96P16 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPRD1AQ96P16 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.09■□□□□ 0.65
RPRD1AQ96P16 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RPRD1AQ96P16 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RPRD1AQ96P16 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RPRD1AQ96P16 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.09■□□□□ 0.65
RPRD1AQ96P16 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RPRD1AQ96P16 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RPRD1AQ96P16 AP000593.1-201ENST00000393668 712 ntBASIC19.09■□□□□ 0.65
RPRD1AQ96P16 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RPRD1AQ96P16 AC112907.2-201ENST00000448639 330 ntBASIC19.09■□□□□ 0.65
RPRD1AQ96P16 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.09■□□□□ 0.65
RPRD1AQ96P16 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.09■□□□□ 0.65
RPRD1AQ96P16 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RPRD1AQ96P16 AL157888.1-201ENST00000631930 593 ntBASIC19.09■□□□□ 0.65
RPRD1AQ96P16 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.09■□□□□ 0.65
RPRD1AQ96P16 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPRD1AQ96P16 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPRD1AQ96P16 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
RPRD1AQ96P16 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
RPRD1AQ96P16 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPRD1AQ96P16 AL031598.1-201ENST00000561511 1773 ntBASIC19.09■□□□□ 0.65
RPRD1AQ96P16 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPRD1AQ96P16 AC112777.1-201ENST00000540175 1423 ntBASIC19.08■□□□□ 0.65
RPRD1AQ96P16 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
RPRD1AQ96P16 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RPRD1AQ96P16 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RPRD1AQ96P16 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RPRD1AQ96P16 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RPRD1AQ96P16 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RPRD1AQ96P16 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RPRD1AQ96P16 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RPRD1AQ96P16 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RPRD1AQ96P16 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.08■□□□□ 0.65
RPRD1AQ96P16 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.08■□□□□ 0.65
RPRD1AQ96P16 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.08■□□□□ 0.65
RPRD1AQ96P16 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RPRD1AQ96P16 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
RPRD1AQ96P16 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.08■□□□□ 0.64
RPRD1AQ96P16 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPRD1AQ96P16 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPRD1AQ96P16 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPRD1AQ96P16 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.64
RPRD1AQ96P16 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RPRD1AQ96P16 MYC-208ENST00000641036 567 ntBASIC19.08■□□□□ 0.64
RPRD1AQ96P16 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPRD1AQ96P16 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.08■□□□□ 0.64
RPRD1AQ96P16 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPRD1AQ96P16 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
RPRD1AQ96P16 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPRD1AQ96P16 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.08■□□□□ 0.64
RPRD1AQ96P16 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPRD1AQ96P16 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
RPRD1AQ96P16 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.07■□□□□ 0.64
RPRD1AQ96P16 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RPRD1AQ96P16 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
RPRD1AQ96P16 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPRD1AQ96P16 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPRD1AQ96P16 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RPRD1AQ96P16 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RPRD1AQ96P16 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPRD1AQ96P16 AL671277.2-201ENST00000458060 996 ntBASIC19.07■□□□□ 0.64
RPRD1AQ96P16 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.07■□□□□ 0.64
RPRD1AQ96P16 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPRD1AQ96P16 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.07■□□□□ 0.64
RPRD1AQ96P16 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.07■□□□□ 0.64
RPRD1AQ96P16 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPRD1AQ96P16 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms