Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.98■□□□□ 0.95
FGD4Q96M96 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FGD4Q96M96 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
FGD4Q96M96 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
FGD4Q96M96 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FGD4Q96M96 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
FGD4Q96M96 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
FGD4Q96M96 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FGD4Q96M96 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FGD4Q96M96 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
FGD4Q96M96 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.97■□□□□ 0.95
FGD4Q96M96 AC074051.2-201ENST00000565115 352 ntBASIC20.97■□□□□ 0.95
FGD4Q96M96 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.97■□□□□ 0.95
FGD4Q96M96 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.97■□□□□ 0.95
FGD4Q96M96 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FGD4Q96M96 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.97■□□□□ 0.95
FGD4Q96M96 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
FGD4Q96M96 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.97■□□□□ 0.95
FGD4Q96M96 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FGD4Q96M96 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.97■□□□□ 0.95
FGD4Q96M96 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
FGD4Q96M96 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
FGD4Q96M96 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.96■□□□□ 0.95
FGD4Q96M96 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.96■□□□□ 0.95
FGD4Q96M96 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
FGD4Q96M96 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FGD4Q96M96 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
FGD4Q96M96 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.96■□□□□ 0.95
FGD4Q96M96 AC104819.1-201ENST00000504587 486 ntBASIC20.96■□□□□ 0.95
FGD4Q96M96 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
FGD4Q96M96 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
FGD4Q96M96 AC138894.3-201ENST00000603787 634 ntBASIC20.96■□□□□ 0.95
FGD4Q96M96 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.96■□□□□ 0.95
FGD4Q96M96 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FGD4Q96M96 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FGD4Q96M96 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
FGD4Q96M96 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
FGD4Q96M96 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
FGD4Q96M96 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
FGD4Q96M96 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
FGD4Q96M96 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FGD4Q96M96 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
FGD4Q96M96 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
FGD4Q96M96 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
FGD4Q96M96 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
FGD4Q96M96 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FGD4Q96M96 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FGD4Q96M96 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
FGD4Q96M96 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.95■□□□□ 0.94
FGD4Q96M96 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
FGD4Q96M96 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
FGD4Q96M96 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FGD4Q96M96 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.95■□□□□ 0.94
FGD4Q96M96 KRT18P41-201ENST00000518924 1277 ntBASIC20.95■□□□□ 0.94
FGD4Q96M96 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.95■□□□□ 0.94
FGD4Q96M96 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.95■□□□□ 0.94
FGD4Q96M96 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.95■□□□□ 0.94
FGD4Q96M96 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.95■□□□□ 0.94
FGD4Q96M96 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.95■□□□□ 0.94
FGD4Q96M96 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FGD4Q96M96 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FGD4Q96M96 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.95■□□□□ 0.94
FGD4Q96M96 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FGD4Q96M96 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FGD4Q96M96 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.95■□□□□ 0.94
FGD4Q96M96 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.95■□□□□ 0.94
FGD4Q96M96 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FGD4Q96M96 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.95■□□□□ 0.94
FGD4Q96M96 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FGD4Q96M96 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
FGD4Q96M96 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.95■□□□□ 0.94
FGD4Q96M96 KRT89P-201ENST00000620027 1478 ntBASIC20.94■□□□□ 0.94
FGD4Q96M96 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
FGD4Q96M96 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
FGD4Q96M96 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.94■□□□□ 0.94
FGD4Q96M96 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FGD4Q96M96 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.94■□□□□ 0.94
FGD4Q96M96 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
FGD4Q96M96 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FGD4Q96M96 AKR1C7P-201ENST00000305623 895 ntBASIC20.94■□□□□ 0.94
FGD4Q96M96 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FGD4Q96M96 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FGD4Q96M96 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
FGD4Q96M96 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.94■□□□□ 0.94
FGD4Q96M96 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.94■□□□□ 0.94
FGD4Q96M96 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
FGD4Q96M96 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.94■□□□□ 0.94
FGD4Q96M96 AL160237.2-201ENST00000556165 472 ntBASIC20.94■□□□□ 0.94
FGD4Q96M96 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
FGD4Q96M96 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
FGD4Q96M96 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
FGD4Q96M96 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.94■□□□□ 0.94
FGD4Q96M96 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.94■□□□□ 0.94
FGD4Q96M96 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
FGD4Q96M96 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.94■□□□□ 0.94
FGD4Q96M96 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
FGD4Q96M96 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
FGD4Q96M96 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FGD4Q96M96 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
FGD4Q96M96 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms