Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 AC068587.9-201ENST00000641814 219 ntBASIC14.18□□□□□ -0.14
LINC00479Q96M42 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00479Q96M42 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00479Q96M42 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00479Q96M42 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00479Q96M42 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00479Q96M42 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00479Q96M42 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00479Q96M42 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LINC00479Q96M42 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00479Q96M42 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00479Q96M42 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.18□□□□□ -0.14
LINC00479Q96M42 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00479Q96M42 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.18□□□□□ -0.14
LINC00479Q96M42 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00479Q96M42 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00479Q96M42 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00479Q96M42 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00479Q96M42 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00479Q96M42 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00479Q96M42 AC084018.2-201ENST00000613093 2607 ntBASIC14.17□□□□□ -0.14
LINC00479Q96M42 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
LINC00479Q96M42 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00479Q96M42 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00479Q96M42 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00479Q96M42 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LINC00479Q96M42 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
LINC00479Q96M42 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00479Q96M42 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00479Q96M42 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC00479Q96M42 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00479Q96M42 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
LINC00479Q96M42 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC14.17□□□□□ -0.14
LINC00479Q96M42 METTL26-203ENST00000397664 604 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC00479Q96M42 DUSP5P2-201ENST00000426873 1033 ntBASIC14.17□□□□□ -0.14
LINC00479Q96M42 AC026271.2-201ENST00000428091 497 ntBASIC14.17□□□□□ -0.14
LINC00479Q96M42 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC00479Q96M42 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
LINC00479Q96M42 AF201337.1-201ENST00000520239 748 ntBASIC14.17□□□□□ -0.14
LINC00479Q96M42 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00479Q96M42 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00479Q96M42 AL160286.2-201ENST00000567150 934 ntBASIC14.17□□□□□ -0.14
LINC00479Q96M42 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
LINC00479Q96M42 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00479Q96M42 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00479Q96M42 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC14.17□□□□□ -0.14
LINC00479Q96M42 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LINC00479Q96M42 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00479Q96M42 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00479Q96M42 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00479Q96M42 AC108860.2-201ENST00000562760 2183 ntBASIC14.17□□□□□ -0.14
LINC00479Q96M42 KATNBL1P6-202ENST00000562413 1466 ntBASIC14.17□□□□□ -0.14
LINC00479Q96M42 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00479Q96M42 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00479Q96M42 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00479Q96M42 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00479Q96M42 POR-209ENST00000439269 1858 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC00479Q96M42 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
LINC00479Q96M42 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00479Q96M42 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00479Q96M42 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
LINC00479Q96M42 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00479Q96M42 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00479Q96M42 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC00479Q96M42 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
LINC00479Q96M42 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00479Q96M42 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC00479Q96M42 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00479Q96M42 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00479Q96M42 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00479Q96M42 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00479Q96M42 SLC25A6P5-201ENST00000435663 894 ntBASIC14.16□□□□□ -0.14
LINC00479Q96M42 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC00479Q96M42 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC00479Q96M42 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC00479Q96M42 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00479Q96M42 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00479Q96M42 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00479Q96M42 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
LINC00479Q96M42 SIRPAP1-201ENST00000448467 1770 ntBASIC14.16□□□□□ -0.14
LINC00479Q96M42 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00479Q96M42 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00479Q96M42 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00479Q96M42 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LINC00479Q96M42 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC00479Q96M42 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC00479Q96M42 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00479Q96M42 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LINC00479Q96M42 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LINC00479Q96M42 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
LINC00479Q96M42 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00479Q96M42 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00479Q96M42 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00479Q96M42 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00479Q96M42 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00479Q96M42 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00479Q96M42 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00479Q96M42 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00479Q96M42 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00479Q96M42 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms