Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CALR3Q96L12 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CALR3Q96L12 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CALR3Q96L12 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CALR3Q96L12 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CALR3Q96L12 ID1-201ENST00000376105 1233 ntBASIC19.63■□□□□ 0.73
CALR3Q96L12 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.63■□□□□ 0.73
CALR3Q96L12 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CALR3Q96L12 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.63■□□□□ 0.73
CALR3Q96L12 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.63■□□□□ 0.73
CALR3Q96L12 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.63■□□□□ 0.73
CALR3Q96L12 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CALR3Q96L12 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
CALR3Q96L12 HCG11-201ENST00000411553 5696 ntBASIC19.63■□□□□ 0.73
CALR3Q96L12 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CALR3Q96L12 AL139384.1-201ENST00000612143 3047 ntBASIC19.63■□□□□ 0.73
CALR3Q96L12 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CALR3Q96L12 AC135776.1-201ENST00000319817 2481 ntBASIC19.63■□□□□ 0.73
CALR3Q96L12 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CALR3Q96L12 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CALR3Q96L12 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CALR3Q96L12 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CALR3Q96L12 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
CALR3Q96L12 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CALR3Q96L12 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
CALR3Q96L12 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CALR3Q96L12 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CALR3Q96L12 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CALR3Q96L12 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.62■□□□□ 0.73
CALR3Q96L12 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CALR3Q96L12 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
CALR3Q96L12 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CALR3Q96L12 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CALR3Q96L12 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CALR3Q96L12 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CALR3Q96L12 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.62■□□□□ 0.73
CALR3Q96L12 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.62■□□□□ 0.73
CALR3Q96L12 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CALR3Q96L12 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.62■□□□□ 0.73
CALR3Q96L12 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CALR3Q96L12 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CALR3Q96L12 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.62■□□□□ 0.73
CALR3Q96L12 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.62■□□□□ 0.73
CALR3Q96L12 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.62■□□□□ 0.73
CALR3Q96L12 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.62■□□□□ 0.73
CALR3Q96L12 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CALR3Q96L12 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.62■□□□□ 0.73
CALR3Q96L12 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.62■□□□□ 0.73
CALR3Q96L12 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CALR3Q96L12 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CALR3Q96L12 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.62■□□□□ 0.73
CALR3Q96L12 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CALR3Q96L12 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.61■□□□□ 0.73
CALR3Q96L12 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CALR3Q96L12 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CALR3Q96L12 FSCN1P1-201ENST00000568912 1481 ntBASIC19.61■□□□□ 0.73
CALR3Q96L12 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CALR3Q96L12 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
CALR3Q96L12 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CALR3Q96L12 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CALR3Q96L12 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.61■□□□□ 0.73
CALR3Q96L12 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CALR3Q96L12 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CALR3Q96L12 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CALR3Q96L12 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CALR3Q96L12 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
CALR3Q96L12 MIR564-202ENST00000385049 94 ntBASIC19.61■□□□□ 0.73
CALR3Q96L12 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.61■□□□□ 0.73
CALR3Q96L12 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.61■□□□□ 0.73
CALR3Q96L12 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.61■□□□□ 0.73
CALR3Q96L12 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CALR3Q96L12 CR392000.1-201ENST00000624770 1228 ntBASIC19.61■□□□□ 0.73
CALR3Q96L12 AC073648.6-201ENST00000641589 218 ntBASIC19.61■□□□□ 0.73
CALR3Q96L12 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CALR3Q96L12 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CALR3Q96L12 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CALR3Q96L12 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CALR3Q96L12 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.61■□□□□ 0.73
CALR3Q96L12 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CALR3Q96L12 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CALR3Q96L12 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CALR3Q96L12 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CALR3Q96L12 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.6■□□□□ 0.73
CALR3Q96L12 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CALR3Q96L12 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CALR3Q96L12 AC138028.4-201ENST00000564984 1845 ntBASIC19.6■□□□□ 0.73
CALR3Q96L12 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.6■□□□□ 0.73
CALR3Q96L12 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CALR3Q96L12 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CALR3Q96L12 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CALR3Q96L12 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CALR3Q96L12 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.6■□□□□ 0.73
CALR3Q96L12 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CALR3Q96L12 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CALR3Q96L12 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CALR3Q96L12 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.6■□□□□ 0.73
CALR3Q96L12 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CALR3Q96L12 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CALR3Q96L12 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.6■□□□□ 0.73
CALR3Q96L12 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms