Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 AC092910.1-201ENST00000482027 1129 ntBASIC21.65■■□□□ 1.06
CDCA5Q96FF9 DHDH-204ENST00000523250 634 ntTSL 5 BASIC21.65■■□□□ 1.06
CDCA5Q96FF9 AC012640.2-201ENST00000561606 901 ntBASIC21.65■■□□□ 1.06
CDCA5Q96FF9 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC21.65■■□□□ 1.06
CDCA5Q96FF9 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDCA5Q96FF9 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDCA5Q96FF9 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDCA5Q96FF9 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDCA5Q96FF9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDCA5Q96FF9 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CDCA5Q96FF9 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDCA5Q96FF9 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDCA5Q96FF9 INTS4P1-201ENST00000438455 1935 ntBASIC21.65■■□□□ 1.06
CDCA5Q96FF9 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.64■■□□□ 1.06
CDCA5Q96FF9 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDCA5Q96FF9 AC112907.3-201ENST00000577781 2400 ntBASIC21.64■■□□□ 1.05
CDCA5Q96FF9 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CDCA5Q96FF9 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC21.64■■□□□ 1.05
CDCA5Q96FF9 KRT18P3-201ENST00000451602 1288 ntBASIC21.64■■□□□ 1.05
CDCA5Q96FF9 AC112482.1-201ENST00000492080 688 ntBASIC21.64■■□□□ 1.05
CDCA5Q96FF9 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC21.64■■□□□ 1.05
CDCA5Q96FF9 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC21.64■■□□□ 1.05
CDCA5Q96FF9 Z83851.2-201ENST00000609564 659 ntBASIC21.64■■□□□ 1.05
CDCA5Q96FF9 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC21.64■■□□□ 1.05
CDCA5Q96FF9 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDCA5Q96FF9 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDCA5Q96FF9 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDCA5Q96FF9 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDCA5Q96FF9 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.64■■□□□ 1.05
CDCA5Q96FF9 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.64■■□□□ 1.05
CDCA5Q96FF9 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDCA5Q96FF9 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC21.63■■□□□ 1.05
CDCA5Q96FF9 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC21.63■■□□□ 1.05
CDCA5Q96FF9 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.63■■□□□ 1.05
CDCA5Q96FF9 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.63■■□□□ 1.05
CDCA5Q96FF9 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.63■■□□□ 1.05
CDCA5Q96FF9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDCA5Q96FF9 HLA-J-201ENST00000462773 1622 ntBASIC21.63■■□□□ 1.05
CDCA5Q96FF9 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDCA5Q96FF9 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC21.63■■□□□ 1.05
CDCA5Q96FF9 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDCA5Q96FF9 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC21.63■■□□□ 1.05
CDCA5Q96FF9 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDCA5Q96FF9 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDCA5Q96FF9 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDCA5Q96FF9 MEG3-211ENST00000452514 461 ntTSL 3 BASIC21.63■■□□□ 1.05
CDCA5Q96FF9 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC21.63■■□□□ 1.05
CDCA5Q96FF9 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC21.63■■□□□ 1.05
CDCA5Q96FF9 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC21.63■■□□□ 1.05
CDCA5Q96FF9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CDCA5Q96FF9 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC21.63■■□□□ 1.05
CDCA5Q96FF9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDCA5Q96FF9 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDCA5Q96FF9 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDCA5Q96FF9 AP005117.1-201ENST00000584346 1413 ntBASIC21.63■■□□□ 1.05
CDCA5Q96FF9 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDCA5Q96FF9 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDCA5Q96FF9 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CDCA5Q96FF9 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDCA5Q96FF9 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDCA5Q96FF9 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDCA5Q96FF9 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.62■■□□□ 1.05
CDCA5Q96FF9 AL163051.1-201ENST00000569214 1512 ntBASIC21.62■■□□□ 1.05
CDCA5Q96FF9 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDCA5Q96FF9 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDCA5Q96FF9 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDCA5Q96FF9 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDCA5Q96FF9 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDCA5Q96FF9 AC068472.1-201ENST00000474589 881 ntBASIC21.62■■□□□ 1.05
CDCA5Q96FF9 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC21.62■■□□□ 1.05
CDCA5Q96FF9 AC113404.2-201ENST00000507884 177 ntBASIC21.62■■□□□ 1.05
CDCA5Q96FF9 RNA5SP415-201ENST00000517246 115 ntBASIC21.62■■□□□ 1.05
CDCA5Q96FF9 AC009533.2-201ENST00000543664 586 ntBASIC21.62■■□□□ 1.05
CDCA5Q96FF9 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC21.62■■□□□ 1.05
CDCA5Q96FF9 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDCA5Q96FF9 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDCA5Q96FF9 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDCA5Q96FF9 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDCA5Q96FF9 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDCA5Q96FF9 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDCA5Q96FF9 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDCA5Q96FF9 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CDCA5Q96FF9 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDCA5Q96FF9 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.61■■□□□ 1.05
CDCA5Q96FF9 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDCA5Q96FF9 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CDCA5Q96FF9 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CDCA5Q96FF9 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDCA5Q96FF9 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDCA5Q96FF9 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDCA5Q96FF9 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
CDCA5Q96FF9 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDCA5Q96FF9 RBSN-204ENST00000449050 903 ntTSL 2 BASIC21.61■■□□□ 1.05
CDCA5Q96FF9 AC004967.1-201ENST00000453589 447 ntBASIC21.61■■□□□ 1.05
CDCA5Q96FF9 OR7E14P-202ENST00000530490 1290 ntBASIC21.61■■□□□ 1.05
CDCA5Q96FF9 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC21.61■■□□□ 1.05
CDCA5Q96FF9 MIR3687-2-201ENST00000577708 61 ntBASIC21.61■■□□□ 1.05
CDCA5Q96FF9 PNMT-203ENST00000581428 677 ntTSL 2 BASIC21.61■■□□□ 1.05
CDCA5Q96FF9 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CDCA5Q96FF9 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms